Gene detail

Detailed information of FUN_010819-T1 in Colpophyllia natans

Genomic Location: contig_15:1453634...1459335
NR annotation: PFX34273.1, Protein mab-21-like 2 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

FUN_010819-T1

ATGGTGTTTTCAGCTGAACAACTgaactttttcaagttttccacTGTTGTGCTAGATGACTTCCCAGTCGCCTTGCGTCAAGTCTTTGTTTCCATGTGGGACACATTGGTCGCTTCACGAGGAATCCCAAAATGGGATGACTCTGTAACGGTACTAAACCTGTTTCTTGTAAAAGAGGGTGGTGCAAAGAAAGTACCCACTTTGAACAAATCCTACATGGAGTGGGACTGTACAGCCTTGTTCAAAGCCACGCTCTTTGCTCAAACCTTTGCCAGAGGTGTCAGCACGTTGGACAAACTGTATGTGAAACCACGTGGTTTATCATCCGGGACATTTCATCACTCTGTTGTCAGCCCGACTGGAAATCAAGCGGAGACGTATGCCTTAGCTTTGGATCAACTGCGCTTGCTACGAAACACACTTTGCCACCAGATAAGCACACGTAAGATTGACAAGGCCACCTTTGATAATTACATACAGCTGGTTAAGGATGCTTTTACTGCACTTGGTCAAAACACCACCAAGATTGATGAGATTGGAAAGCTTGGTGAAGACGACTTTCCCACAACAAGACTTAAACAATTGAAAGACGAGTTGAAGAAGGAAAAAGATGCTGCCATCAAATTTAAGCAGATTGATGATCATCTTACCAAGATTGGGTCACAAGTGGTTGATCTTGGTTCAAACATGGAAGATGTTAAAACTGATGTAACAGATCTGAAGTCACAAGTGGAGGATGTGGGGTCAGACGTGAACGATGTAAAAACTGATGTAACAAATGTTAAGACACAAGTGGAGGATGTAGGGTCGGACGTGAAAGATGTAAAAGCTGAATTAACAGATGTGAAGTCACAAGTGGAGGATGTGGGGTCAGACGTGAAAGATGTAAAAGCTGAATTAACAGATGTGAAGTCACAAGTGGAGGATGTGGGGTCAGACGTCAAAGATGTAAAAGCTGAATTAACAGATGTGAAATCACAAGTGGAGGATGTGGGGTCAGACGTAAAAGCTGAACTAACAGATATGAAGACAAAAATGCAACAAGTCGGTTCGGAAGTGAAGGGATTAAGTGCACGTGTTGACGCGATGCAAGCAGGAAGCTCAGAAGGTCTATTAGTTCCTGTCTCGTGTATACCAGACAAGATACCGTACTTTGTCGGTCGCCAAAAAGAGTGTGAAGCAGTCCTCGACCATTTAACAAACAAGGCAACTCGATTGGTTGATATTTGGGGTCCACCAGGATTTGGAAAGACGTCATTGGCTATAAACGTAGCACATCATTTACGAGAAATGAAGATTCCTGTGTATTTTACTTCCCTTCGTGGAATGAAAAGTAAAGATGAAATAGTGTCAAAGCTTTTAAGTATATTCACAGAAGCTAAACAGGCGTTCTATGTCTCACCCTCCCATTGGCTCATCCAGCGTTTTCAACAACTGGAGAAAACGTTTATCCTAATTTTAGATAATGCTGACGACATTTTGGAATCTGGAGACACCGAACTTAAAGAAGACTTCCTAAGATTTACAGAGGAAGTTCTTGCCCAATGCAGTAACATCAAGCTTCTCTTCACTACTCGTGAGCGTCTAGACTACCTGAGTCACAAGCTGCCCATCCATCAAGAAAGAGTTGGTGTGTTGGATGAGGTATCCTCGGTCACTTTAGTGCAATCCCTATTGCAATGTGTTTCGGACAACGACTGTGATTGTATAGTAAAGGAATGTGGACAAGTTCCTTTGGCAATGCGATTGATGTGTGGCATTATGAAGGAAGAAAACGTTTCACTTTCTGAGCTCTCGGAGGAACTGAAGGCCTCAACGCTTGTTGAAGTTTTGGATGATGAAAGTCTTTCCGATGATGCTCGACTGAAGACCATAATCAACAGATCATTTGGAAGACTTAGTGACCAAGAGAGGGATGCGTTTGTCTCGCTGACTGTTTTTACGAGTATCTTTGGAGTGCAGGAAGCTACGGCTGTTTTGGATTTCAAGGCAGCAAGACAAACCAAGAAAATGCTTCATTCGCTGAAACGAAAGTCTTTACTAGACTGCAGCGACGATTTTGAATCCTGCACAATTCATTCACTTTTGCGATCCTTCATTGATGAAACGAGAAATGCTAACCCCGGAGTTCAAATCGTTCTCAGTGCAGCTCAACTTCGTTTCTACGACTATCACATCACTAGTTTTGAAGttgcaaatgaaaaatttttAACCGGTTATTCCAGTGAAGCATTTCAAGTTTTTGTTCGTCAGAGGGACAGCATCCTCATTTCTCTTGAAAATGGAGCAAAGAATGATGACCTCTATTCAAAGGTTGTAAAAGTTTTGTCCAAGGCTGAGATTTTTTTGCGCGCTCTACTGCCTAACGAaaagttattattcaacaaactTTACTCTACCACAATAGAAGAGGCCAGAAatgaaaagaacaagaaaaggcAACATCGAGATGATGAATGCATTCTGCTTGCCGCCAAGTCATTTGGCTCCTTGGGTGGGTTTTACGTAGACCGTCAAGACTTGGACCTTTCCTTACAAGCTGGTGTTTGTAACACTGATAGCTGTCCAGCGAAGCGTTTATGCTACCTTGGCATTCATCAGCTGCTATGTGGGAAAACGGACGACGGAATATCATATCTAAAGGCTTCTGTAGATCGTCTAAACAGTGACTGTGACGAGAAAGTTCTTAAGGTACTTGCCTATCATGTGCTTGCAGTctattacagaaaaaaaggagACATGGAAAAAGCATctcagtttgaaattttctgtaACAGAGAGTGTAAGTCTGCGTCGTTTTCTCCCGCTGTTTGCAATTTGTTCCTACGAGACATCTCTTCAGGTGAAGTGACAGACTTCAGCATTATCATGGAGCAAGATGTGTTCTTTTTTGTAGCTGTAGCTGAATTACTACCTCTACTCTACAGCGAGCTACAGTTTGGCAAGCAGACGGAAAAAGAACGATCTATAATGACCCAGCATCTTGTTGGACTGCACAAAGGTTTTCTTGCATTATTTGACAAAGGAATTATCCATGTAAGGGTACTAGAAGCATGTAGCAATGCGTTGTATAGTTTGAAGTGTTTCAAGGAGGCAGCAGAAGgctttcaaataataataaacgaGCTTGAAAAGACACAGGGAAGTGAACTCAACCGCATCGCTCAGAATTACTTTTTTCGCAGTTCGGCtctaaaagaaatgaaagactACAAGGGAGCAGATTTCTGTTTAAAGAAATCCCTTGATATTAGAAGGCAACTGTTACAAGAAATTCTAGACCtaaagcaaagcaaaaaaatCGTCGGAGAATTTGACTCACTTATTATTTGTTTGGAAATGCAAAAAAATCTCAATGGTGCTACTGCTGGCCCCACTGACGACTTCAACGCCCTCTTCGAAGAACTGAAAAGTGCTCTTAAGTCAATGGAGAATTATAATAAAGCGGATCACGCTGAAATCGCAACATGTTACAACAAGCTTGGTCATTGCTACTTTCTTTTGCATGACTGGAATGCAGCCCACGAGTTATTTGAGCGAGCCCTAAAGATAGATGAGGAGCACGTGGGTGATTCTGATGCCAAAGTATCATATCTATTTAATATAGGGAGTGCGTGCTTAAATATGAATCGGAACATAGAGGCTGGCGAGGCATTCCAAAGGGCTTTGAATCTGAGGAAATTGTTGGGGATTGAAGATCACGTGGATACTGCCACTATTTACCAACTACTTGGAGAGAACTATCTAGCGTTGGAAGAGTTCAGTGAAGCTCTTAAGGCGGGTCACCAGTCCTTACAGCTTAGGAAGAAGCATTTAAGAGATCACATCCTCACAGCCCAAAGCTTTTCTCTAACAAAAGCTGTGTATTTTAAGATGGGGAAGTACGAGGCTGCAAGGGAGCATGCTCAGCACGTTGCTAATTTAACAAAAGCATTGCTCGGTGACCATGAAGAAACCGCCACTGCGTTCGACCAACTGACTACAGTGTCTTTTGAAATAGGGGACTACAGAGGAGCTCTTAATGCTTGTCAGGAAGTTAGGAACATAAGATTGAAGTTATTAGGCAAACACCCGGATACAGCTATAAGCTTTCACCAATTTGGAAGCATATGTGTTAAGATGGACAATTTTAAGGAAGCTGCTAGGTCCTTTCGAAAAGCGTCAGAGATGAGGCTAATTCTTCTTGGTGACCACTTAGACACAGCACTGAGCTGTCACTGCCTTGGTGAAGCACAGCTATTAAACGGTGACTTCAGCGGTGCTTTGGAATCTTTGCACACAGCCTTACGTATCAGAGAGGAAGAACTGGGGATCCACTCAGAAATGGCCGCAACTTCAGAGCTGCTAGGCCGCGCCTATGAAGGCCTAGGTTTACACGATTTAGCCTCTCAGCAAATCGGAAGAACACTTGAAATGAGGGAATACCTACAGACAGATGGTGTGAACACTGCACTGGGTGATGCCAGTAATCCGTTTCTCGGGTGTAACTCAGAAATAGAATACCTAAGTATGATATATCCGAACATTCCGCGAGTCTAG

Transcript

FUN_010819-T1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR051787	Family	Effector and Ciliary Development-Associated Protein	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45641	TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan