Detailed information of FUN_010880-T1 in Acropora pulchra

Genomic Location: ptg000007l:3847115...3848251
NR annotation: XP_015768691.1, PREDICTED: transcriptional regulator Myc-2-like isoform X2 [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P49709Transcriptional regulator Myc OS=Carassius auratus OX=7957 GN=myc PE=3 SV=1
Q90341Transcriptional regulator Myc-1 OS=Cyprinus carpio OX=7962 GN=myca PE=3 SV=1
P06171Transcriptional regulator Myc-A OS=Xenopus laevis OX=8355 GN=myc-a PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002214 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01056
all species →		Myc_NMyc amino-terminal regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002418
all species →		FamilyTranscription regulator MycInterproscan
IPR050433
all species →		FamilyMyc family transcription factorsInterproscan
IPR012682
all species →		DomainTranscription regulator Myc, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45851
all species →		MYC PROTO-ONCOGENEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_010880-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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