Gene detail

Detailed information of FUN_010975-T1 in Colpophyllia natans

Genomic Location: contig_15:2984858...2987560
NR annotation: XP_020612484.1, serine/threonine-protein kinase PDIK1L-like [Orbicella faveolata]
Species Colpophyllia natans · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_010975-T1

actcagttcaattaccattataaatacCTCTCTTCGGTAGCCAATCATAACGCGAATTTACCACGTCATGCAGAACCATTTCCCAGAAATAGAGCTCGTGCGGGAAGGGGGTGGGGGCGATTAAACACTTTTAGAAAACACAAAGTTTGCATCTTTTCAAGGTTATGACTAATATTGTGTTAACAAAAATGGGTTATCTTTGAAGTAAACGATGTGGAATGCTGGTCCCGACTAAGACTGAGTAATAAAACGAAATTCGAAATTCAAGCTGCAAATCACCTCGGAAGGAATGATTTGATGCCCCCCTCCCTCAACCTATTCCGAGAAATCGTCACCTGCTTCGATTTGAAACTAAGCTGCGTCACACTTTTTCTTTGATCATTTAAGCTTATATATAGTGCTGTAAAGCCAGAAAAGCCAACATAATGCACTCAGCTACTAAAACTCTTCCTACAAGTGTTCGAGTCGAGGGAAGAACAGTCAGAATCCAACAGCGACTTGGCAGTGGCGCTTTTGGTGTCGTTTATGAAGTCGAAGACAAGGCAACTTCAACCGTATACGCGTTGAAAGATATTCTTTGTTTGAATGACGCGGCTCTTCGCAATGCTCTCCAGGAAGCTATCACACTGAACAACATCTCTCATCCGAACGTGATTGCCGTCATGGGAGCAGACCGGTTTCAAGACAGTAAAGGCTTGAAACACATGCTGCTTTTGACCGAGTATTGCTCGGGCGGAAGTTTAAACGACCGCCTTGCTCGACCGAGTAGTGAAGAAATGAATATGAAGTGGATTCGTCAAACAGCCGCAGCCCTTGCCCACCTCCACTCACGCAGAGTGGTTCACCGCGATTTGAAAGCGGATAATGTGCTGTTGACCGCAAAAGAAGATGTGAAGTTGGCCGACTTTGGCCTCGCTCGCGAGTACATCGCACTCAAACAAATCGATGGTAATCAAGACGAAGGCTCATGGCTGGCAAGTTACACGCAATACTACATGAACTCAGTAGTTGGTACCCCATACTGGATGGCTCCTGAAGTCTTCACTGGTCATTACACCGAAAAAGCCGACGTGTTTTCTCTTGGTACCTTGTTTTTCGCAATCCTAGAGCGAGATTTCATCGAGTTTGGTGGTAAAAGAATTTACGGTGCCTTCGTAAATATTCGTGGTGTGCGTAAGGTTGGCCTTGGGCTTGTTATGTCAGAGTATGGTAGTGGTATTAGAATTAAGTTCTCCAGTCACGCACAAGGGTCCAACGCTATCCAATGGGTCGTACTTGAGGCCTTGCAGTACGACAAAAATGATCGACCAAGCGCTAAAACGATTTATGACCTAGTCATGGACATTCCTCAAGGTGTAAGGCTCCAACAAGAGAATTCACAGCAGTCGTCAAATAAAAAGTTCTTGTCCCAACAACAGTGGAAGTCAGACCGACAGTGGTCATGGTGGTCTGACCAACGGTGGAAGTCAGATCAACAGTGGAAGTCAGACCGACAGTGGCGGTCAGACCAACAGCGGACATCAGAAAGGGTCGTACTTGAGGCCTTGCAGTACGACAAACATGATCGACCAAGCGCTAAAACGATGTATGACCAAGTCATGGACATTCCTCAAGGTGTAAGGCTCCAACAACAGAATTTACAGCAGTCGTCAAAGAAAAAGTTCTTGTCCCAACAACAGTGGAAGTCAGACCAACATTGGAGATCAGACCGACAGTGGCCATGGTGGTCTGACCAACGGTGGAAGTCAGACCAACAGTTGAAGTCAGACCGACATTGTCGGTCAGACCAACAGTGGACATCAGACGAGGAGTCCCGTTTCAACAACAGGTCCCATTCCACCAACAGCAGTGACTTCAACAACTGGTCCCGTTCCAACAGCAGCATGGCTTCAGGAACAGATTATGCCACTTGTATAACAACACAAGGCTTCGAGCAACATCATGGCTCCAGCATCAGCATGGCTCCAACAACAGATTATACCCCTTCTATAACTGGGCTCCAGCAACATCACGGCTCCAACATCAGCATGGCTCCAACAACAGATCATACCAGTTATATAACAACTGGGCTCCAGCAACATCACGGCTCCAACATCAGCTTGGCTCAAATAAGAGATTCCGTTCCAACAACAACACGGCTCGAGCAACATTATTTTTCCGACATGGCTCAAAGAACAACAGCAACTCCTGGTGAATGGATTGAATGTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NU47	Serine/threonine-protein kinase pdik1l-A OS=Xenopus laevis OX=8355 GN=pdik1-a PE=2 SV=1
Q8N165	Serine/threonine-protein kinase PDIK1L OS=Homo sapiens OX=9606 GN=PDIK1L PE=1 SV=1
Q8QZR7	Serine/threonine-protein kinase PDIK1L OS=Mus musculus OX=10090 GN=Pdik1l PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001083 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR050660 all species →	Family	NEK Serine/Threonine Protein Kinase	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43671 all species →	SERINE/THREONINE-PROTEIN KINASE NEK	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08286	E2.7.11.-; protein-serine/threonine kinase	EC:2.7.11.-	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.