Gene detail

Detailed information of FUN_011289-T1 in Colpophyllia natans

Genomic Location: contig_16:1433757...1445099
NR annotation: XP_022805486.1, T-complex protein 1 subunit theta-like [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_011289-T1

GAAGGGAAAACTTTCAAGATGGCGCTCTCGGTTCCCAAAACGATGTTTCAACACATGCTCAAAGATGGAGCAAAGCATTTCTCAGGTCGTGATGAAGCTGTTTACAGAAACATTTCAGCATGCCGACAATTTACCCAGATAACAAGATCATCCTTAGGACCAAATGGAATGAATAAAATGGTTGTCAATCATTtggaaaaattatttgtaaCAAATGATGCTGCTACAATAATCAAAGAATTAGAGGTTCAACACCCAGCAGCCAAGATGTTGGTGTTAGCTTCACAGATGCAGGAACAGGAAGTTGGAGATggaacaaattttgttttagtcttTGCTGGTGCACTTCTTGATGCAGCTGAAGAGCTTCTCAGAATGGGTCTCTCACCTCCTGAAGTGATTGAAGGATTTGAAAAAGCATGCAAGAAGGCCTTAGAAATTTTACCAGACTTGAGTTGTTCAAGCTTATCAGATCTACGAGATAGTGAAGAAGTTACAAAAGCTCTTAAAACTGCTGTAGGCAGtaaacagTATGGAAATGAAGATTTCCTGTCAGAGCTTATAACAAAAGCATGTGtCTCAATCCTCCCAGAGAAGAGTCCATTTAATGTAGACAATGTGAGAGTAGCAAAAATTTTGGGCTCTGGTATCCACAGTTCAGAAGTAGTTTCAGGAATGGTCTTCAAACGAGAGGTTGAGGGTGATGTCAAAGCACTGAGAGATGCCAAGATTGTAGCATTTTCATGTCCACTGGATTCAATGAACACAGAAACCAAGGGAACAGTGCTCATCAGAAATGCCGAGGAGTTAAAGAACTTCAGCAAAGGAGAGGAAGAGCAGCTAGAAAAGgaaaTCAAGTCTATTGTTGACACTGGTGTTAATTGCATTGTATCTGGTGGGAAAGTTGGCGAGATGGCTCTTCACTTTTGTAACAAGTATCATATTCTAGTAGTAAGGTTAACCTCGAAGTTTGACTTGAGGAGGCTATGTCGATCAGTTGGTGCAACAATACTTCCAAAATTTACTACCCCTACTTCAGAGGAGATTGGTCATTGTGATGAAATCAGGGTGTCTGAGATTGGAGGAACCTCTGTCACAATTTTCAAACAAGAGCGCGAGGAGACTGCCATATCCACTTTGGTCATTCGAGGCTCGACTGAGAACATCATGGATGATGTGGAGCGAGCTGTTGATGATGGTGTGAACACATTCAAAGCACTCACTCGTGATAATCGCTTTGTACCCGGAGCCGGCGCCACTGAAATCGAACTCGCTAAACAGATATCTAGCTTTGGAGAGACATGTGCAGGCCTTGAACAGTACGCTATCCAGAAATTTGCGGAATCTCTTGAGGCCATTCCCAGGACCCTCGCGGAAAATGCTGGCGTGAAAGCCACGGAAGTTATCTCCAAACTGTACGCTGCCCACCAGGGTGGGGACAAGAATGCGGGATTTGACAATGAGGGTGGTGGTGCTGCAGTGAAAGATGCAGTGAAAGCTGGAATTCTCGACTTGTATCTTGTAAAGTACTGGGCTCTCAAGTTCGCTACAGATGCAGCTGTTACAATACTTAGAGTAGACCAGATAATCATGTCGAAACCGGCAGGAGGACCGAAGCCGAAGGACAATCCTAACTGGGATGAAGATTAACCTTGGAATTGTGGATTTAGAGCAACCATGTTTGTGAAAGAAGAATATCGAGCCTGCTGTCTGATCCATTGTACTCTCAacagtttttctattttttcctgTTTCCTCGTGCAAGCTTTGACCGTGACATGGCAGCCGAAACCAACCGACGGCGCGGCTTAGTAGGCGGTCTGGGAACTAGCTTAGGCAGCGAAATTTGGAAGAGAAGGCAAATTGTCTCGGCCAACAAATCTTTGGTTATGTTTGCTGCTCTTCCTTGTTTTCGTCCAAATAATTGCATGATGATGTTCAAACTACAGGGTTTAATAGAGAAACCGCTTGTTGTCAGTGCAATAGCAAAGTGTCTTGTTGAACTTTAAATTAATCCGTGGACACCTTGTCAGTCATCGGCGCGACATTAAAAGTGTCTTGACCAAGAATGTTACCTTCTTACTCAA

Protein

Uniprot

Uniprot term	Description
Q6EE31	T-complex protein 1 subunit theta OS=Gallus gallus OX=9031 GN=CCT8 PE=1 SV=3
Q3ZCI9	T-complex protein 1 subunit theta OS=Bos taurus OX=9913 GN=CCT8 PE=1 SV=3
P50990	T-complex protein 1 subunit theta OS=Homo sapiens OX=9606 GN=CCT8 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00118	Cpn60_TCP1	TCP-1/cpn60 chaperonin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012721	Family	T-complex protein 1, theta subunit	Interproscan
IPR017998	Family	Chaperone tailless complex polypeptide 1 (TCP-1)	Interproscan
IPR027409	Homologous_superfamily	GroEL-like apical domain superfamily	Interproscan
IPR002423	Family	Chaperonin Cpn60/GroEL/TCP-1 family	Interproscan
IPR002194	Conserved_site	Chaperonin TCP-1, conserved site	Interproscan
IPR027410	Homologous_superfamily	TCP-1-like chaperonin intermediate domain superfamily	Interproscan
IPR027413	Homologous_superfamily	GroEL-like equatorial domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11353	CHAPERONIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0140662	Molecular Function	ATP-dependent protein folding chaperone	Interproscan
GO:0005832	Cellular Component	chaperonin-containing T-complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09500	CCT8; T-complex protein 1 subunit theta	-	Cilium and associated proteins	ko03037	deepkoala