Gene detail

Detailed information of FUN_011723-T1 in Acropora pulchra

Genomic Location: ptg000008l:600719...615391
NR annotation: XP_029180472.1, low density lipoprotein receptor adapter protein 1-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q6ZV70	LanC-like protein 3 OS=Homo sapiens OX=9606 GN=LANCL3 PE=1 SV=2
Q8CD19	LanC-like protein 3 OS=Mus musculus OX=10090 GN=Lancl3 PE=2 SV=2
Q8C142	Low density lipoprotein receptor adapter protein 1 OS=Mus musculus OX=10090 GN=Ldlrap1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05147	LANC_like	Lanthionine synthetase C-like protein	Repeat	Interproscan
PF00640	PID	Phosphotyrosine interaction domain (PTB/PID)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR007822	Family	Lanthionine synthetase C-like	Interproscan
IPR006020	Domain	PTB/PI domain	Interproscan
IPR012341	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12736	LANC-LIKE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0031179	Biological Process	peptide modification	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K12474	LDLRAP1, ARH; low density lipoprotein receptor adapter protein 1	-	Membrane trafficking	ko04131	deepkoala