Gene detail

Detailed information of FUN_011802-T1 in Acropora pulchra

Genomic Location: ptg000008l:1629959...1636992
NR annotation: XP_029214462.2, kinesin-like protein KIN-14K [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_011802-T1

ATGGGGAATGGATCAATTTCAAGACCCGAAAACCTCGATGGAATGCATGTTTCTCCTTCTGCTCCTAGTGAATTTATCGTGTCGCGACAAAGAGGAGTTAACAATGGCTACGCAGCTAATAATGGCACTTTTGATCATTATTACCACCCGGCGGGAAGTTCTGGCTCAAGAATGGACACAATACGTTCACAGTCGAATGGGTACGACTCACATGCGAATCATCTGAATTATGGCCAAAATGACTATTGGACGAGCGGGTCCAATTCGGTTGCTCCTACCTCGTACTCCAGATCGCACTACGGTAAAGATCCATACGGGAAAAATCTTAACGAATCATCGCACCAGTCTCCCCTGTCAATGCACCGAAAGCCTAAGAAAGAAAAATATGGTCAAGGGACACATGGAAGGAATAATTATTATGGAAATAGTTACGAGAATCCGGGATCTTATCAAGACTGGGAGATCAATGAAAATGGAAATTCTAACTCTGATGAAATTGTTTTCGAAGTATTTCATTGCGTAAAAACCGGAAGAGATTATAACGTTATCAATGTGGATGGAGTTAGATATCTTGTGAATTCATGGGATGCAGCTGATGATTTGCAGCCCTTTCCTGAGGAATGGTACCAGCATGGCTACATAGAAGGTCAACAGCCTGTGACAGCAGATTACTCAGTGTATGAGAAAGGGTCTTGCAATGAGGAGCCGTCTGATAATTCATGGGTACCAAGATGGGAAGATGATCGCATGGGGATGATGGAGCACCCTACTAGAGGACTTTTGACTACCTACTTTGAAGAAAACAAAGTCAATGTTCTTCATGTGTATGAAAACAAATCGGGCTCGTGGTTGAAAATGCCTTTATCGTGGGAACTTCATATCCAAGACGTCAGTTCACGTGTAACTGCTATTCAAGAAGCCTTTCCGGAGTGGGATGACAGATTCGAGATCTTGGCCTTACTACGACAATGCAACTACGATCTTGATGAGGTGATCAATACTTATTTGAATTTGCTAGCGGAAGACGTTCTGAGCAAAAAAGGCAGCTCCAAGCGACTGAAAGGTCGCTCAGGTTCCAGCCAGGATCACTCTGCCGAGGTTGAACTGCTGAAGGAGAAGGTTGAACAACTCGAGGAGAAATTACGAGAGAAAGAATCGCAATTAGAAGAGTCCAAGGCCGCTAATGAAGACTTGAAAGCAAGGTTAAAGTCGTCCGAAGAAGCGGCCCGAAAACTGCAAGTCAAAACAGAATGTCAGCAGTTAGAGATAGAACAACTGAAGTCTGCACCAGACCCGGAACCCGTCTTACCGGTTATTGAAGTGGTACAACCTGTTATTGAGAAGATTCAGCCTACAATTGAGGTGATTCAACCTGTCGCTCAACCGGCTCAACCTGTTATCTCAACGCCAACGCCGCAACCGCCACCGCTGCCGCCGCCGCCGCCTGCCCCCAAAGCGCCTACTATTTCTAAAGAGACTTGCAGAAACATCAAAGTATCCGTTCGCTTGTTTTCTCGGATGTTGGTGGAGTTGAAGAATTGCTTCAACGTGGAAATGGAAGGGATAGCTTTGATCATGGGTCGAGCGCAAAGCTCCCTTGGCAAAATGAAAGACGTAGATCAAGGTTCAGGCAAAGAGCTTGCAGAACTTCGCGCCTTGTACCACAAGGAAGTTATGCAGAGAAAGCTGCTTTACAATCAACTTCAGGAACTGCGCGGCAACATACGAGTTTTCTGTCGGTGTCGCTACGATCGAAAGGCAGATACAAAGTTTGAATTCGTTACAGATCAGGATTTAAATGTCACATCGGCCTCGGGGCAGAAGAAGAGCTTTAGATTTGACCGAGTGTTCCCTCCTTCGAGCACTCAGGAGGAAGTATTCCAAGATACTATGCCAGTCATTACATCGTGTGTCGACGGTTACAATGTCTGCATTATGGCCTATGGTCAAACAGGCGCAGGAAAAACGTACACAATGATGGGAACAGAAAAAGACCCTGGTGTTAACATAAGGTCCATTCTTGAGCTTCTGAGAGTTTGCGAAGAACGAAAGACCGTAGATTACTCCATGTGCGTCTCCATGGTGGAGGTTTACAATGAGACGATCAGAGATCTTCTTACTGAAAGCAATGGCTCGCAGCCGCTCAACATTCAAATGAGGAATAAACAGCTTATCATTACAGATGTGACTGAGATTGAAGTTAAATCAGCCGCGGATATCAAGACTATCATGGAAACAGGGGATAAGAACCGTTCCGTTGGAGCCACTAAAATGAACACCAACAGTTCCCGTTCGCATCTTCTTCTGCTTCTCCGAGTTCAAGGCACAGATAAAGTGACGAACGCCGTCACACGAGGCACCCTTGCTTTGGTTGACTTAGCAGGTTCAGAAAGAATCTCAAAGACCGAAGCAACGGGCCAAAGGCTTGTGGAGGCCGCAGCTATTAACAAATCTCTTTCGGCACTGGGCCAGGTTTTCACGGCTTTACGTACAAACGCCATGCACGTGCCATACAGAAACTCTAAGCTAACGCAGCTGATGCAAGGATCCCTTGGGGGTGACGGTAAGGCATGCTTGTTTGTCAATATCAGTCCGCTGGCCAGTAATCTCAGTGAGACCGTGAGCACGTTGCAGTTCGGATCAGCGGCGAAACAAGTGCAACTTGGGAAAGCTACGCAGAATGTTACCCCAGGAGGCAAAAAAAAATAA

Transcript

FUN_011802-T1

CGGCCGTCTAAGATATTAAAACAATGAAGGAATTCATTTCGTCTCAAACATCATTCAAAGAATAGAAGACGAGTGATTGTTGCTTATTCGCTTTTGCGGAACGAGAATGGGGAATGGATCAATTTCAAGACCCGAAAACCTCGATGGAATGCATGTTTCTCCTTCTGCTCCTAGTGAATTTATCGTGTCGCGACAAAGAGGAGTTAACAATGGCTACGCAGCTAATAATGGCACTTTTGATCATTATTACCACCCGGCGGGAAGTTCTGGCTCAAGAATGGACACAATACGTTCACAGTCGAATGGGTACGACTCACATGCGAATCATCTGAATTATGGCCAAAATGACTATTGGACGAGCGGGTCCAATTCGGTTGCTCCTACCTCGTACTCCAGATCGCACTACGGTAAAGATCCATACGGGAAAAATCTTAACGAATCATCGCACCAGTCTCCCCTGTCAATGCACCGAAAGCCTAAGAAAGAAAAATATGGTCAAGGGACACATGGAAGGAATAATTATTATGGAAATAGTTACGAGAATCCGGGATCTTATCAAGACTGGGAGATCAATGAAAATGGAAATTCTAACTCTGATGAAATTGTTTTCGAAGTATTTCATTGCGTAAAAACCGGAAGAGATTATAACGTTATCAATGTGGATGGAGTTAGATATCTTGTGAATTCATGGGATGCAGCTGATGATTTGCAGCCCTTTCCTGAGGAATGGTACCAGCATGGCTACATAGAAGGTCAACAGCCTGTGACAGCAGATTACTCAGTGTATGAGAAAGGGTCTTGCAATGAGGAGCCGTCTGATAATTCATGGGTACCAAGATGGGAAGATGATCGCATGGGGATGATGGAGCACCCTACTAGAGGACTTTTGACTACCTACTTTGAAGAAAACAAAGTCAATGTTCTTCATGTGTATGAAAACAAATCGGGCTCGTGGTTGAAAATGCCTTTATCGTGGGAACTTCATATCCAAGACGTCAGTTCACGTGTAACTGCTATTCAAGAAGCCTTTCCGGAGTGGGATGACAGATTCGAGATCTTGGCCTTACTACGACAATGCAACTACGATCTTGATGAGGTGATCAATACTTATTTGAATTTGCTAGCGGAAGACGTTCTGAGCAAAAAAGGCAGCTCCAAGCGACTGAAAGGTCGCTCAGGTTCCAGCCAGGATCACTCTGCCGAGGTTGAACTGCTGAAGGAGAAGGTTGAACAACTCGAGGAGAAATTACGAGAGAAAGAATCGCAATTAGAAGAGTCCAAGGCCGCTAATGAAGACTTGAAAGCAAGGTTAAAGTCGTCCGAAGAAGCGGCCCGAAAACTGCAAGTCAAAACAGAATGTCAGCAGTTAGAGATAGAACAACTGAAGTCTGCACCAGACCCGGAACCCGTCTTACCGGTTATTGAAGTGGTACAACCTGTTATTGAGAAGATTCAGCCTACAATTGAGGTGATTCAACCTGTCGCTCAACCGGCTCAACCTGTTATCTCAACGCCAACGCCGCAACCGCCACCGCTGCCGCCGCCGCCGCCTGCCCCCAAAGCGCCTACTATTTCTAAAGAGACTTGCAGAAACATCAAAGTATCCGTTCGCTTGTTTTCTCGGATGTTGGTGGAGTTGAAGAATTGCTTCAACGTGGAAATGGAAGGGATAGCTTTGATCATGGGTCGAGCGCAAAGCTCCCTTGGCAAAATGAAAGACGTAGATCAAGGTTCAGGCAAAGAGCTTGCAGAACTTCGCGCCTTGTACCACAAGGAAGTTATGCAGAGAAAGCTGCTTTACAATCAACTTCAGGAACTGCGCGGCAACATACGAGTTTTCTGTCGGTGTCGCTACGATCGAAAGGCAGATACAAAGTTTGAATTCGTTACAGATCAGGATTTAAATGTCACATCGGCCTCGGGGCAGAAGAAGAGCTTTAGATTTGACCGAGTGTTCCCTCCTTCGAGCACTCAGGAGGAAGTATTCCAAGATACTATGCCAGTCATTACATCGTGTGTCGACGGTTACAATGTCTGCATTATGGCCTATGGTCAAACAGGCGCAGGAAAAACGTACACAATGATGGGAACAGAAAAAGACCCTGGTGTTAACATAAGGTCCATTCTTGAGCTTCTGAGAGTTTGCGAAGAACGAAAGACCGTAGATTACTCCATGTGCGTCTCCATGGTGGAGGTTTACAATGAGACGATCAGAGATCTTCTTACTGAAAGCAATGGCTCGCAGCCGCTCAACATTCAAATGAGGAATAAACAGCTTATCATTACAGATGTGACTGAGATTGAAGTTAAATCAGCCGCGGATATCAAGACTATCATGGAAACAGGGGATAAGAACCGTTCCGTTGGAGCCACTAAAATGAACACCAACAGTTCCCGTTCGCATCTTCTTCTGCTTCTCCGAGTTCAAGGCACAGATAAAGTGACGAACGCCGTCACACGAGGCACCCTTGCTTTGGTTGACTTAGCAGGTTCAGAAAGAATCTCAAAGACCGAAGCAACGGGCCAAAGGCTTGTGGAGGCCGCAGCTATTAACAAATCTCTTTCGGCACTGGGCCAGGTTTTCACGGCTTTACGTACAAACGCCATGCACGTGCCATACAGAAACTCTAAGCTAACGCAGCTGATGCAAGGATCCCTTGGGGGTGACGGTAAGGCATGCTTGTTTGTCAATATCAGTCCGCTGGCCAGTAATCTCAGTGAGACCGTGAGCACGTTGCAGTTCGGATCAGCGGCGAAACAAGTGCAACTTGGGAAAGCTACGCAGAATGTTACCCCAGGAGGCAAAAAAAAATAACTTAAGCACAGTGCGGTTGAAATTAGCTGTGTTGCCCTTGCGACAAACATGGTCGAGTGCTCCCAAAGAACGCCAGCCATGGATTTCTCGGGGATGGGGGGTGGGTTAAATAGGGCACTTCAACTTTTTTCCATAGGCTAATGCACAAACAATCAGAAGCTCTTACTATTTAGAACTCAATCAGTGAATTAACTACAGTTCACTAGAACAAATCCAAAACGACAAATTCGTTGACGCCGTCAAATTTCTCAGTCCGGTCTGAACTGGGAATAAGAATGCGTTACGGAGGCTAAATTAAACCGTATAAGATAAAAGATGTGCGTATTGACAAGATGCTTAGTTGTACCGGAAATTCGTGCAAAGGTTTGCGTCGATGGCTGGGGAAGTCAAACCCAGGCCTTAGCTGTTGCTCTGGGAAGCGATTCGTAAGTAAAACTATTAAGACCGAGAGCTAAGCAGTCCCCAGTTTCAACATCAAGCTTTTACCGTGCACACTTCATACTTGCATATATGACATCACCACTAAAAGGTTATAATTTATTTTTTGAATGAGGAAACCTTTATTTTATCAACAAAGTATACTGAAGATCATTATTTTTCTATAAATTATATAGGTTGTATTTTCAGAGTCATTTTTGTAGCTAATCTGAAAACAAAGAAAAGCGAAATAGTTTATAATGGTTCTTTTAGAGGCTTCCCTCATGATTTATGTAACAAAGGAAATCACTACCATGAAGAGGGTTTGGATATGTCAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B9FAF3	Kinesin-like protein KIN-14E OS=Oryza sativa subsp. japonica OX=39947 GN=KIN14E PE=2 SV=1
F4IL57	Kinesin-like protein KIN-14I OS=Arabidopsis thaliana OX=3702 GN=KIN14I PE=2 SV=1
F4IJK6	Kinesin-like protein KIN-14R OS=Arabidopsis thaliana OX=3702 GN=KIN14R PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010096 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02845 all species →	CUE	CUE domain	Domain	Interproscan
PF00225 all species →	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003892 all species →	Domain	Ubiquitin system component CUE	Interproscan
IPR001752 all species →	Domain	Kinesin motor domain	Interproscan
IPR019821 all species →	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR036961 all species →	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR027640 all species →	Family	Kinesin-like protein	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47972 all species →	KINESIN-LIKE PROTEIN KLP-3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0043130 all species →	Molecular Function	ubiquitin binding	Interproscan
GO:0003777 all species →	Molecular Function	microtubule motor activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0007018 all species →	Biological Process	microtubule-based movement	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0007017 all species →	Biological Process	microtubule-based process	Interproscan
GO:0015630 all species →	Cellular Component	microtubule cytoskeleton	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10406	KIFC2_3; kinesin family member C2/C3	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.