Gene detail

Detailed information of FUN_011862-T1 in Acropora pulchra

Genomic Location: ptg000008l:2196729...2201050
NR annotation: XP_029193528.2, MRN complex-interacting protein-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_011862-T1

CTAAAGGAAAAACAATAGAGAGAACGTGGAGATGAAATTTGTCTTTAAAAGACTCTAGAAGCCAAAGGGATGAGAGTTTTACACAGCTCAAAAAGTTAAAAGGAAGTATTAAAGATGTGTTATTTGTTAGGTGCGTATCCGCGCATATAAAACATCTGTAAAAACACAAGTAAACAGTCATCGAGTATAAAACGTTCACTTCGGTTGCTCACAGTATGGTATATTCATAAATGAACAGGTTGATAAAAGGGATCACAACGGTATTTTCACGTCGTTTTATGAGATTACTCACCTAGATACTATGCAACCCTTGGGCAAGCCAACGATATCTTGTACAATCTTGTACAGAGTTGATTGGATAGAGACTGGACATAAAGGTACATCTCATGCAGCACAAATGACAATATCTGTGGATCATTTTCGCGCCGTTACTCGAAATTAAATTATTTGCACCATGGTTCAAGAATTTAGGATCCTGCGATGTTTCTCGTGTACAACCTTTCAAGTGCACCAAGTGAAGAAGAGCAAAAAATGGGCTTGCAAGGTTTGTGGGGAGAAGCAGTCTGTCAAAAGGGTATACGCTCAGGGCAGCGGTCAGGATTGCCGAAAGCATGTACAGAAACTTAATATGAGAAGTGGAGACCTTCAAATGACAAAGGGCTTGACCTTATTAAATGACAGTGATGAAAACAGTGTTGCTGAAAACCCTTCTTGTTCAAGTGAAGATGAAGATAGAAGACATGTTGCAAAACCGAGTCTCCATTTGAAAAAAAGCAAATGGAATAAGTTTATGGATGTGTCTTCTGGTAATCGCAATGATGAACAAGAATTTGATGATTTTGATGTGACAACAGTTAAGGAAGTCTCTGGAAAGGCTGTTTGTAGAGGAAAGAGAAAGTTAGCAAAGCAAGCTGTTTCATTAGATCACTGCCACAATGAGAAGAGATTCAAAAACATTTCCAACAATAATGCTGAAAATATGCTAGGAAGTAAAAAGAGAGTTTCCCAGTCCCCGAGGGATCTGGGATCACAGGAGCAGAATATTAGATCTCAGCTTTCAAACCCTGAAAATGTTCAAGACAGTTGTAGCTTGTATTTTGCAAAGGCAACCAGGGACCCAGCCCCAGACAACAAAGATTCACTGAATTCAATTGAAAATAAAGCAGCTTCTTACTCAAATGCTAGTAAATGGACAAAATATTTACCCATGTCATCTGAACCTGAGGAAACAAGCTCACAGCTGACTTTTGCAACTCCAGGCTTTGTTGAGTATACCAGATTGCCATCTGAAGCAGGTTCTGGTAGAAGTCAGACTTATTGTAATGTACCCCTTGCTGACGGATTAGGAGACTGCGCATCAAACAGTCTTCAAGCTGAATCATTGCATGCTAAGGACTTGTTTAATGTGGAAGATGATTTAGAGGAAGGGTGGTGGGATAGAATCTGATATTATCAAGAATAATTTGTGGTAAATAAGCATTACTGAGTAATTTAATATGTGTTGATGTGAAAGACAGAACTGAATCTTATGAAAGTATTAATTTTTAATTTGTACTTCTGTTGGAATGATGAATCATGAAAAAATTTTCAATACACCCATGTTAGATTATGTATGTGAAGTCTACACTGTGGGGAATATAGTGAATCATAGATGGTAGTTTCTTCAAAAAAATTATGATTGCTTAATTCAATCTTTCATACTTCAACACACACACATGCAAAACACAATACACAAACTTTTTGAAACGTGAAGGGAGTTGTAGTTTTCCCAATGAATTTGAGAAATTTGAAAAAACCAACCTCCTACCCACCAAAAAATATTATTGTTACAAGTAACTGAGAGATTTCATGGGCGTTGAATTGCACCTTGTGGGATAAATAATATATCTTCCATGTTATACCTCTGCTGAAAGAAGTCCTCTGTAATCACTAAGTGATAATAATCACTCTATTCGATTTGGAAGGTCATCTCAACTCTATAAATGCCCACAACAATTATGACTATGCGTGCTCTTCAAACGATTCCTGGCTAAAAATAATCAAGGTGTTATGTACCTGTC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q32PP1	MRN complex-interacting protein OS=Danio rerio OX=7955 GN=mrnip PE=2 SV=1
Q9D1F5	MRN complex-interacting protein OS=Mus musculus OX=10090 GN=Mrnip PE=2 SV=1
Q6NTE8	MRN complex-interacting protein OS=Homo sapiens OX=9606 GN=MRNIP PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009660 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15749 all species →	MRNIP	MRN-interacting protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032739 all species →	Family	MRN complex-interacting protein	Interproscan
IPR049472 all species →	Domain	MRN complex-interacting protein, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15863 all species →	MRN COMPLEX-INTERACTING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0007095 all species →	Biological Process	mitotic G2 DNA damage checkpoint signaling	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_011862-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.