Genomic Location: ptg000008l:2270241...2282397
NR annotation: XP_015752100.1, PREDICTED: DNA polymerase lambda-like [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families
| CDS |
| FUN_011870-T1 |
| Transcript |
| FUN_011870-T1 |
| Protein |
| FUN_011870-T1 |
| UniProt accession | Description |
|---|---|
| Q9QXE2 | DNA polymerase lambda OS=Mus musculus OX=10090 GN=Poll PE=2 SV=1 |
| Q5RKI3 | DNA polymerase lambda OS=Rattus norvegicus OX=10116 GN=Poll PE=2 SV=1 |
| Q9UGP5 | DNA polymerase lambda OS=Homo sapiens OX=9606 GN=POLL PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001983 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00571 all species → | CBS | CBS domain | Domain | Interproscan |
| PF14792 all species → | DNA_pol_B_palm | DNA polymerase beta palm | Domain | Interproscan |
| PF14716 all species → | HHH_8 | Helix-hairpin-helix domain | Domain | Interproscan |
| PF01595 all species → | CNNM | Cyclin M transmembrane N-terminal domain | Domain | Interproscan |
| PF10391 all species → | DNA_pol_lambd_f | Fingers domain of DNA polymerase lambda | Domain | Interproscan |
| PF14791 all species → | DNA_pol_B_thumb | DNA polymerase beta thumb | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000644 all species → | Domain | CBS domain | Interproscan |
| IPR046342 all species → | Homologous_superfamily | CBS domain superfamily | Interproscan |
| IPR027421 all species → | Homologous_superfamily | DNA polymerase lambda lyase domain superfamily | Interproscan |
| IPR036420 all species → | Homologous_superfamily | BRCT domain superfamily | Interproscan |
| IPR001357 all species → | Domain | BRCT domain | Interproscan |
| IPR028207 all species → | Domain | DNA polymerase beta, palm domain | Interproscan |
| IPR044751 all species → | Domain | Ion transporter-like, CBS domain | Interproscan |
| IPR002054 all species → | Domain | DNA-directed DNA polymerase X | Interproscan |
| IPR043519 all species → | Homologous_superfamily | Nucleotidyltransferase superfamily | Interproscan |
| IPR002008 all species → | Family | DNA polymerase family X, beta-like | Interproscan |
| IPR045095 all species → | Family | Ancient conserved domain protein family | Interproscan |
| IPR019843 all species → | Binding_site | DNA polymerase family X, binding site | Interproscan |
| IPR022312 all species → | Family | DNA polymerase family X | Interproscan |
| IPR010996 all species → | Domain | DNA polymerase beta-like, N-terminal domain | Interproscan |
| IPR002550 all species → | Domain | CNNM, transmembrane domain | Interproscan |
| IPR037160 all species → | Homologous_superfamily | DNA polymerase, thumb domain superfamily | Interproscan |
| IPR018944 all species → | Domain | DNA polymerase lambda, fingers domain | Interproscan |
| IPR029398 all species → | Domain | DNA polymerase beta, thumb domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12064 all species → | METAL TRANSPORTER CNNM | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0003887 all species → | Molecular Function | DNA-directed DNA polymerase activity | Interproscan |
| GO:0006281 all species → | Biological Process | DNA repair | Interproscan |
| GO:0010960 all species → | Biological Process | magnesium ion homeostasis | Interproscan |
| GO:0016779 all species → | Molecular Function | nucleotidyltransferase activity | Interproscan |
| GO:0034061 all species → | Molecular Function | DNA polymerase activity | Interproscan |
FUN_011870-T1.
