Detailed information of FUN_011890-T2 in Acropora pulchra

Genomic Location: ptg000008l:2505991...2529583
NR annotation: XP_044177838.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114959623 [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9ULI1NACHT and WD repeat domain-containing protein 2 OS=Homo sapiens OX=9606 GN=NWD2 PE=1 SV=3
Q149M9NACHT domain- and WD repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=NWD1 PE=1 SV=3
Q6P5U7NACHT and WD repeat domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nwd2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009465 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan
PF13191
all species →		AAA_16AAA ATPase domainDomainInterproscan
PF17908
all species →		APAF1_CAPAF-1 helical domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052752
all species →		FamilyNACHT and WD repeat domain-containing proteinInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR041664
all species →		DomainOrc1-like, AAA ATPase domainInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775
all species →		Conserved_siteWD40 repeat, conserved siteInterproscan
IPR041452
all species →		DomainAPAF-1 helical domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19871
all species →		BETA TRANSDUCIN-RELATED PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_011890-T2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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