Detailed information of FUN_011907-T1 in Acropora pulchra

Genomic Location: ptg000008l:2746919...2747896
NR annotation: XP_015769453.1, PREDICTED: ribosomal RNA-processing protein 14-C-like [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P36080Ribosomal RNA-processing protein 14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RRP14 PE=1 SV=1
P70279Surfeit locus protein 6 OS=Mus musculus OX=10090 GN=Surf6 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008957 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04935
all species →
SURF6Surfeit locus protein 6FamilyInterproscan
PF15459
all species →
RRP1460S ribosome biogenesis protein Rrp14FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007019
all species →
FamilySurfeit locus 6Interproscan
IPR029190
all species →
DomainRibosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domainInterproscan
IPR029188
all species →
DomainRibosomal RNA-processing protein 14, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14369
all species →
SURFEIT LOCUS PROTEIN 6Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0005730
all species →
Cellular ComponentnucleolusInterproscan
GO:0042273
all species →
Biological Processribosomal large subunit biogenesisInterproscan
GO:0042274
all species →
Biological Processribosomal small subunit biogenesisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_011907-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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