Detailed information of FUN_011957-T1 in Dendrogyra cylindrus

Genomic Location: contig_17:3934380...3977636
NR annotation: XP_020602031.1, tetratricopeptide repeat protein 28-like [Orbicella faveolata]
Species abbreviation DCYLI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000014 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12770
all species →
CHATCHAT domainDomainInterproscan
PF13424
all species →
TPR_12Tetratricopeptide repeatRepeatInterproscan
PF13181
all species →
TPR_8Tetratricopeptide repeatRepeatInterproscan
PF13374
all species →
TPR_10Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990
all species →
Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734
all species →
RepeatTetratricopeptide repeatInterproscan
IPR024983
all species →
DomainCHAT domainInterproscan
IPR052386
all species →
FamilyG-protein-signaling modulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45954
all species →
LD33695PInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000132
all species →
Biological Processestablishment of mitotic spindle orientationInterproscan
GO:0001965
all species →
Molecular FunctionG-protein alpha-subunit bindingInterproscan
GO:0005092
all species →
Molecular FunctionGDP-dissociation inhibitor activityInterproscan
GO:0005938
all species →
Cellular Componentcell cortexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_011957-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP