Detailed information of FUN_012060-T1 in Acropora pulchra

Genomic Location: ptg000008l:4723233...4726494
NR annotation: XP_029193676.2, transcription factor Sox-14-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q32PP9Transcription factor Sox-14 OS=Danio rerio OX=7955 GN=sox14 PE=2 SV=1
B0ZTE2Transcription factor Sox-14 OS=Xenopus laevis OX=8355 GN=sox14 PE=2 SV=1
A4QNG3Transcription factor Sox-14 OS=Xenopus tropicalis OX=8364 GN=sox14 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000488 (this species only)
Transcription factor familyHMG · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505
all species →		HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050140
all species →		FamilySRY-related HMG-box transcription factorsInterproscan
IPR009071
all species →		DomainHigh mobility group box domainInterproscan
IPR036910
all species →		Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10270
all species →		SOX TRANSCRIPTION FACTORInterproscan

 Gene Ontology
No Gene Ontology signature was detected for FUN_012060-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_012060-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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