Detailed information of FUN_012124-T2 in Dendrogyra cylindrus

Genomic Location: contig_17:6011462...6055375
NR annotation: XP_020615590.1, peptidylprolyl isomerase domain and WD repeat-containing protein 1-like isoform X1 [Orbicella faveolata]
Species abbreviation DCYLI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96BP3Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=PPWD1 PE=1 SV=1
Q5NVL7Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Pongo abelii OX=9601 GN=PPWD1 PE=2 SV=1
Q29RZ2Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Bos taurus OX=9913 GN=PPWD1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003192 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400
all species →		WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19848
all species →		WD40 REPEAT PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000027
all species →		Biological Processribosomal large subunit assemblyInterproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K12736PPWD1; peptidylprolyl isomerase domain and WD repeat-containing protein 1EC:5.2.1.8
Chaperones and folding catalystsko03110deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP