Gene detail

Detailed information of FUN_012198-T1 in Dendrogyra cylindrus

Genomic Location: contig_17:6775584...6786653
NR annotation: XP_022779761.1, kinesin-like protein KIF2A [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

FUN_012198-T1

ATGGACAAATACAGTAAACTTGTTGTGGGGATCAAAGTCGACATTCAACGAACCGACGGTCGCATCCACTCATCAATGATTAGTGGTGTAAACCTGGACACCAAAAGTGTAACAGTGGAATGGTATGAAAATggtgaaacaaaaggaaaagagATTGAAGTTGACCAGATCTTCGCACTAAATCCAACTCTTGTTGtccaaccaaaaccaaaacccacACCGTCAAATAAAAGGATATCTACTACACCAAGCAATAAGAATGCAAGAAATGAAAACCACAGTATTTCTTCACCTAAAGTTCATCCACCATCAGCTAAAGTTGAACGTCCCATGGCACTTAACCTTGCTAATGATGACGATGGAGGCTCACATGTGGAGGTTGTACCCAAAGATAATGCAGAGTCTAATCCAGTGAACAGAAGACGCTCCAATTGTGTGAAGGAGATTGAGCGATTAAAAAAGAATAGGGAAGAAAGAAGAGCACAGCAGCAAGAGCAAAGAGAAATGAAACTTCGCCTTCAACAAGAAGTTGATCCTGGGAATCCCAGCTGGGAATTTATACAAATGATAAGGGAGTATCAAGCCAATTTAGATTTTAAAGGATTAACAATGTCAGACCCAGTGATAGACCACCAGATTTGTGTGTGTGTCCGCAAACGACCACTCTCCAAGAAAGAACTCAATAAAAAGGAAATCGATGTCATCATAGTACCAAAGGGTGATTACTGTGTGGTCCACGAGCCTAAATTGAAAGTTGATCTCACAAAGTACCTGGAAAATCACAAATTCTGGTTTGATTATGCTTTTGATGAGAATGCAAATAATGAATTGGTGTACAGATATACAGCAAAACCACTCGTGGACACAATTTTTAACCAAGGAATGGCGACATGCTTTGCATACGGTCAGACAGGCAGTGGAAAAACTCATACCATGGGTGGTACATTTAGTGGCAAACAACAGGATTGTTCCAAAGGAATTTATGCATTGGCAGCAACAGACGTGTTTAAACTGAACAAATCCACCAAACACAAAAACAAGGATCTTTTAATATCTGCAAGTTATTTTGAGATTTATGGGAGCAAGGTATTTGACTTgctcaacaaaagaaaaaggttAAGAGTGCTGGAGGATGGCAATCAACAAGTTCAGGTCTGTGACTTGGAGGAAAAGATAGTGAATTCAGTACAAGATACTCTTAAGCTAATAGAGCTCGGTAATAAACTCAGGACATCTGGGCAAACGTCCGCCAATCAAAACTCATCTCGGTCTCACGCTGTTTTCCAGATCATCTTGAGAAAGAGAGGCTACAGGAAAGACGGTGGAGGGGGACAACTTTATGGCAAATTCTCACTGATAGATTTAGCAGGAAATGAACGAGGAGCTGATACATCGACCGCTGACAGGCAGACACGTCTTGAAGGCGCAGAAATAAACAAGAGTTTACTAGCTTTGAAGGAATGCATCAGGGCTCTTGGACGCAAAGGAGCTCATCTGCCCTTTAGAGCAAGCAAACTCACACAGGTTCTGAGAGACTCGTTCATTGGGGAAAAATCCAAGACATGTATGATCGCCATGATTTCTCCCGGTATGAGCTGTTGTGAACACACATTGAACACTCTGCGTTATGCTGACAGAGTCAAAGAGCTTGGTCCTGAGAGCAATGCTAAGAAGAAAGCGGCACCGTCTGATGGAGGAGAAGACGACACGAGTCCTGAAGAGATGTCTGCTCTATCTGATGGACGACATCTCAACAATGTGGATCTCGCTCTTCTTTGTAATCACAGCGGCTCTGGTGAACAATCTCAAGAGTTATACACCTTCCATGAAGCAGTGTCTCAGCTACAAGATGCTGAGGATAAACTGGTGGACGACCACAGGAAAAACATTGAAGAGACCAGAACACTTTTACAAGAAGAAGATAAGTTGATCGAGAGAGTGGATATGGATGTCGATTACAACATGGAAGACTATGTACGACGCCTGGACGAGTTACTGGCGCAAAAAATCGAGAAATTCACGCAGCTGCGAGAAAAAGTAAACAAGTTTAAGAAGCAGcttgaagaggaagaaatggcgAGCAGAAACATTAGAAAGCTACCgggttattaa

Transcript

FUN_012198-T1

AGTTGCTAATCCAAATGGAAATTTCAGAACTTGTCGAGAATATAGGATTTTGAGCGGAAAATCTAAATACGGAAACGAATGAGTAACTCCACGACTGCAGATCCATAAAAATCAGATATTAACTTAAAATCGAACTGCACTACCGCAATGGACAAATACAGTAAACTTGTTGTGGGGATCAAAGTCGACATTCAACGAACCGACGGTCGCATCCACTCATCAATGATTAGTGGTGTAAACCTGGACACCAAAAGTGTAACAGTGGAATGGTATGAAAATggtgaaacaaaaggaaaagagATTGAAGTTGACCAGATCTTCGCACTAAATCCAACTCTTGTTGtccaaccaaaaccaaaacccacACCGTCAAATAAAAGGATATCTACTACACCAAGCAATAAGAATGCAAGAAATGAAAACCACAGTATTTCTTCACCTAAAGTTCATCCACCATCAGCTAAAGTTGAACGTCCCATGGCACTTAACCTTGCTAATGATGACGATGGAGGCTCACATGTGGAGGTTGTACCCAAAGATAATGCAGAGTCTAATCCAGTGAACAGAAGACGCTCCAATTGTGTGAAGGAGATTGAGCGATTAAAAAAGAATAGGGAAGAAAGAAGAGCACAGCAGCAAGAGCAAAGAGAAATGAAACTTCGCCTTCAACAAGAAGTTGATCCTGGGAATCCCAGCTGGGAATTTATACAAATGATAAGGGAGTATCAAGCCAATTTAGATTTTAAAGGATTAACAATGTCAGACCCAGTGATAGACCACCAGATTTGTGTGTGTGTCCGCAAACGACCACTCTCCAAGAAAGAACTCAATAAAAAGGAAATCGATGTCATCATAGTACCAAAGGGTGATTACTGTGTGGTCCACGAGCCTAAATTGAAAGTTGATCTCACAAAGTACCTGGAAAATCACAAATTCTGGTTTGATTATGCTTTTGATGAGAATGCAAATAATGAATTGGTGTACAGATATACAGCAAAACCACTCGTGGACACAATTTTTAACCAAGGAATGGCGACATGCTTTGCATACGGTCAGACAGGCAGTGGAAAAACTCATACCATGGGTGGTACATTTAGTGGCAAACAACAGGATTGTTCCAAAGGAATTTATGCATTGGCAGCAACAGACGTGTTTAAACTGAACAAATCCACCAAACACAAAAACAAGGATCTTTTAATATCTGCAAGTTATTTTGAGATTTATGGGAGCAAGGTATTTGACTTgctcaacaaaagaaaaaggttAAGAGTGCTGGAGGATGGCAATCAACAAGTTCAGGTCTGTGACTTGGAGGAAAAGATAGTGAATTCAGTACAAGATACTCTTAAGCTAATAGAGCTCGGTAATAAACTCAGGACATCTGGGCAAACGTCCGCCAATCAAAACTCATCTCGGTCTCACGCTGTTTTCCAGATCATCTTGAGAAAGAGAGGCTACAGGAAAGACGGTGGAGGGGGACAACTTTATGGCAAATTCTCACTGATAGATTTAGCAGGAAATGAACGAGGAGCTGATACATCGACCGCTGACAGGCAGACACGTCTTGAAGGCGCAGAAATAAACAAGAGTTTACTAGCTTTGAAGGAATGCATCAGGGCTCTTGGACGCAAAGGAGCTCATCTGCCCTTTAGAGCAAGCAAACTCACACAGGTTCTGAGAGACTCGTTCATTGGGGAAAAATCCAAGACATGTATGATCGCCATGATTTCTCCCGGTATGAGCTGTTGTGAACACACATTGAACACTCTGCGTTATGCTGACAGAGTCAAAGAGCTTGGTCCTGAGAGCAATGCTAAGAAGAAAGCGGCACCGTCTGATGGAGGAGAAGACGACACGAGTCCTGAAGAGATGTCTGCTCTATCTGATGGACGACATCTCAACAATGTGGATCTCGCTCTTCTTTGTAATCACAGCGGCTCTGGTGAACAATCTCAAGAGTTATACACCTTCCATGAAGCAGTGTCTCAGCTACAAGATGCTGAGGATAAACTGGTGGACGACCACAGGAAAAACATTGAAGAGACCAGAACACTTTTACAAGAAGAAGATAAGTTGATCGAGAGAGTGGATATGGATGTCGATTACAACATGGAAGACTATGTACGACGCCTGGACGAGTTACTGGCGCAAAAAATCGAGAAATTCACGCAGCTGCGAGAAAAAGTAAACAAGTTTAAGAAGCAGcttgaagaggaagaaatggcgAGCAGAAACATTAGAAAGCTACCgggttattaaaaaaaaaacctaacaATCTGCAGCCCCAGGGTATCCTTGGTGGGGTCAAGTGTTGCCCGTTTATCCCGGATGTGCGCACCTCTGCTGCTTTAAAGCTTGGTCAAGGAATATGTTATGGATTTTGGACGTTTTAGTTCAAGTTGAAGGAAACATTATTTAAGTTATATCTTGTACAGGTCAGCAAGCGTGAAAAGATCGATATAATCTAGTTGATGTTGTTTGGTGGCGTCGTTTATTTATTACATGAAGTAAGAGTGCAGGTGTTAAACAGATAGCAATCGGTGTCCACACTGAAATAATGGTTGTTGTTTAGCGCAGTTAATTGTATTATATTAGATTGTGCAGCTTAAATGGATTTTTTATCACGTTTGTATAAATGTTAAATCGGCGCTTCTTTTTTCATGTGGACGATCGGGAACTGTTTTCGTCAAATCTTCGTGAAAGTACTTGACGAATACTTCCGAGACTTATTGTCCAATCATAAAACAGCACGAACACACGAAGTTCTCCGAATGAGTCGCGAATATTCGATCAATACCGTGCTTGTTTCTTCAACAGTAGCAGTAACCAGTGATATAAGGAAGCGTAGTGAAGGTTTCCCTGTCTTTCCTAACGTTGCCCAAAGGAAAGCAGTTTTTCGACAAAAACAAATATAATCAGCCTCAAAACCAACGTGTCGCTTAACACACGTGTTAACCTC

Protein

Uniprot

Uniprot term	Description
O00139	Kinesin-like protein KIF2A OS=Homo sapiens OX=9606 GN=KIF2A PE=1 SV=3
P28740	Kinesin-like protein KIF2A OS=Mus musculus OX=10090 GN=Kif2a PE=1 SV=2
Q9WV63	Kinesin-like protein KIF2A OS=Rattus norvegicus OX=10116 GN=Kif2a PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47971	KINESIN-RELATED PROTEIN 6	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10393	KIF2_24, MCAK; kinesin family member 2/24	-	Cytoskeleton proteins	ko04812	deepkoala