Gene detail

Detailed information of FUN_012215-T1 in Acropora pulchra

Genomic Location: ptg000008l:6447679...6454852
NR annotation: XP_029179294.2, hydroxylysine kinase-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_012215-T1

CCGGTCATCAGTGACAAGATTAGTTCAGGTGATGATCCTTTGTTATTCCGCACCAAGTACAGTTAAAGAGTGTTTGGCCTAAGCAGTAATTTTGCCAAAGTTATATTCTTTGGTTTCCCTTGAAAGTTACGAACATCCTTTCAACGAAGATTGTGCGCTAGGAAATTTGTAAACAATCAATACGTACAAGTTACTACCAGGTCACTCCTCTCAAGAACTGCCCCATAACAAATTAACGATGCCATATTTTAAAGTTCTAAATACATTCCCATCTATATGACAGCATATTTACAACAATTATACTTTTAATACCTTTTCGTCTTCAGCAGTAGTCACATGCGCCTAAACGGCGCCTATTTTTTGTGATTGGTCATCGCACTTCCACGGGAGTCTTACTCCAGGGGAATTCGATTTAAAAATAAATCGGTCTATGAAAACGCCATGACAGAAATATGAGGGAGTTGCATGCCCCTACTCATAGGCTCCTGACAGTACAGAACAGTAGTTTTTTTCATGCTGTGAACGAGAGTTTTGGACATTTCTCAGCCTTTCTGGACCTATCATCAGCTTGAAATGGCCAGCATCACATTACTTCCTAGAACGGAACTGACGACCTAAGCACATGATCTCAGATTAAATTTGTTCCTTTCCATCTCCGTACCTCTTCTGTTACCATTTTAAATTCCAGTTTAGAAGGTTTAGTTCCTAACGAAATTGTCATGAGTACTGCGTCGGTGGGGATGTCAAATACGAAAATCCGATATCAAGCGAGTTGACAAAGTTCAAATTTCCACCGCAAATTGTTTTCAAAGCTGAAGTTACGAGCGTTAGCCTTTCGTCAGTACAAAACCGCGGAAAAGCAAACAGGGATGCTGATTCCTGCGATACGCAGTTAAAGGCTAAGGTGAAGGGAGTAAGCGTGTATGCATGAATTTTACTTGATTTATTTGTATGCTATTCCAGTTTTAATTAATCAGCATGTTTCCTTGGGAACATACGGGTACGTCAGTCACTTCAAGGTAGAAGGCGCGTGGAATATTTTAGCAGTTATTACACCGTCTGCAGTGTGTATTGCTGTTTTCGTGCGCCACCAGAGGACGGCACTCACTTACTAGAACGCCGTTCATCTGTGAAACTTTATTTTTTATTTTCAAAACAGAGTCTCCCGTGAATTGCCGAGAGTTCGTGATCTCGGGATGACCGGAACTCAACTGACAATCTAAACGGAAGTCCAAAACTAGGGGGTCGCAACATGGACAGCAAGTTGAATTTGGAAGAAAGAGACGCGAAAAATTTCAGGCTGACAGGTGGACTTATCGATCTGAAGAGACCCACTGTAGACAAGGATGAAGCGACTGAGTTGGCGAGTTTATTGTTCGGTCTTCGTGTTTCTAACCAATTGCAAGTCAGGGAATTTGATAGCTATGATGACAGGAATTACTACATGAAAGGAACACTCACACACCGGCCAGCGAATGAAAATACCGACGGAGCTTTGCTTCAAGAAAATGAGGATGAATTTGTACTGAAGATCTTAAACAACCTTGATTCAGAGAATTTACCGTACGTGAACGCTCAAAACGAAATGATGCTTTACTTGAACGCACGTGGATTTAATTGTCCGCTTCCCATGCAGTCTTTGAAAGGCCCGTACACCCTGCTGTACAAATCAAAATCTTCAGAGGAAAAGATGGGAAACAAGGAGGTTCCTTACCGGGAACACGCTGTTCGTCTTCTTAGCTTTGTCCCGGGAAGACTGATCAAAGATGTTAGCTGTACAACCGACCTTCTATTCGATCTTGGCACATACGTGTCCAAGATTCACACTGCTCTTCAGGGATTTCATCATGCAGGCATTGGATCTTTGGTGAAACGAGAGTGGGATTTGTCCCAGCTGTTTGTCCTTGAAAGTTACATTACGATGGCAAGCCAGAATGAAAGAGAGCTGGAAGTATTTCAAAATGTCTACAAGAACTTCATCAAGGAAGTTATTCCTCAACTTGGCAATCTGGAAAAACACGTCATTCATGGTGATCTGAATGATGACAACATTCTTGTAGTTCCAAGGCATAATGGCAATGGGCACAAAATTGCCAGTGTCCTGGATTTTGGAGATGTCTCTTTTTCTCATAGGGTATTTGATATTGCTATTTGTATGATGTATATGATATTGCTGAGGGTAAAACAAGGGAATCCTCACAAAGAAGCCATCAGAGCCGTTGGACATTTGTTGTCTGGGTATCAGAGTGTTAATAGTCTCACAGAATTAGAACTTTCTCTCCTGTACTGGTCCGTTGCTGGACGGCTTCTTCAGTCTACTTTAATTGGAAGGTGTAAGCAGTCTTTGGAACCTGAAAATATTTATTTAAGTCAAGTTAGCAAAGTAGGATTTGATGTACTTTCATCTTACATTCTTACTACAAGAGAAGAAGTCCTTGATTCCTGGTTGCTGATTGGGAGTAGCCAGTCTCTCAGCTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A8WFT6	Hydroxylysine kinase OS=Danio rerio OX=7955 GN=hykk PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001030 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01636 all species →	APH	Phosphotransferase enzyme family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002575 all species →	Domain	Aminoglycoside phosphotransferase	Interproscan
IPR050249 all species →	Family	Pseudomonas-type Homoserine Kinase	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21064 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0019202 all species →	Molecular Function	amino acid kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18201	AGPHD1; hydroxylysine kinase	EC:2.7.1.81	Lysine degradation	ko00310	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.