Detailed information of FUN_012252-T1 in Acropora pulchra

Genomic Location: ptg000008l:6825349...6843172
NR annotation: XP_029195924.1, splicing factor 3A subunit 3-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q12874Splicing factor 3A subunit 3 OS=Homo sapiens OX=9606 GN=SF3A3 PE=1 SV=1
Q9D554Splicing factor 3A subunit 3 OS=Mus musculus OX=10090 GN=Sf3a3 PE=1 SV=2
O46106Splicing factor 3A subunit 3 OS=Drosophila melanogaster OX=7227 GN=noi PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12108SF3a60_bindingdSplicing factor SF3a60 binding domainDomainInterproscan
PF13297SDE2_2CReplication stress response SDE2 C-terminalDomainInterproscan
PF11931SF3a60_Prp9_CSF3a60/Prp9 C-terminalFamilyInterproscan
PF16837SF3A3Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021966DomainSplicing factor SF3a60 binding domainInterproscan
IPR000690DomainMatrin/U1-C, C2H2-type zinc fingerInterproscan
IPR025086DomainSDE2-like, C-terminal domainInterproscan
IPR024598DomainSplicing factor SF3a60 /Prp9 subunit, C-terminalInterproscan
IPR051421FamilyRNA Processing and DNA Damage Response RegulatorInterproscan
IPR031774DomainSF3A3 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12786SPLICING FACTOR SF3A-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12827SF3A3, SAP61, PRP9; splicing factor 3A subunit 3-Spliceosomeko03041deepkoala

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