Gene detail

Detailed information of FUN_012336-T1 in Acropora pulchra

Genomic Location: ptg000008l:8044953...8046039
NR annotation: XP_029200139.2, DNA polymerase theta-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8CGS6	DNA polymerase theta OS=Mus musculus OX=10090 GN=Polq PE=1 SV=2
O75417	DNA polymerase theta OS=Homo sapiens OX=9606 GN=POLQ PE=1 SV=2
O18475	DNA polymerase theta OS=Drosophila melanogaster OX=7227 GN=PolQ PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004235 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270 all species →	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011545 all species →	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002298 all species →	Family	DNA polymerase A	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10133 all species →	DNA POLYMERASE I	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0003887 all species →	Molecular Function	DNA-directed DNA polymerase activity	Interproscan
GO:0006261 all species →	Biological Process	DNA-templated DNA replication	Interproscan
GO:0006302 all species →	Biological Process	double-strand break repair	Interproscan
GO:0097681 all species →	Biological Process	double-strand break repair via alternative nonhomologous end joining	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_012336-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.