Genomic Location: contig_18:2044677...2075678
NR annotation: XP_020611937.1, uncharacterized protein LOC110050360 isoform X1 [Orbicella faveolata]
Species Dendrogyra cylindrus · all data for this species · gene families
| CDS |
| FUN_012376-T2 |
| Transcript |
| FUN_012376-T2 |
| Protein |
| FUN_012376-T2 |
| UniProt accession | Description |
|---|---|
| B5DF89 | Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2 |
| Q6DE95 | Cullin-3-A OS=Xenopus laevis OX=8355 GN=cul3a PE=1 SV=1 |
| Q6GPF3 | Cullin-3-B OS=Xenopus laevis OX=8355 GN=cul3b PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000152 (this species only) · gene tree & orthology |
| Ubiquitin family | E3|E3 adaptor Cullin RING|Cullin · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16095 all species → | COR | C-terminal of Roc, COR, domain | Family | Interproscan |
| PF00888 all species → | Cullin | Cullin family | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR032171 all species → | Domain | C-terminal of Roc (COR) domain | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR001373 all species → | Domain | Cullin, N-terminal | Interproscan |
| IPR016159 all species → | Homologous_superfamily | Cullin repeat-like-containing domain superfamily | Interproscan |
| IPR036388 all species → | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR045093 all species → | Family | Cullin | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11932 all species → | CULLIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006511 all species → | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0031625 all species → | Molecular Function | ubiquitin protein ligase binding | Interproscan |
| GO:0016567 all species → | Biological Process | protein ubiquitination | Interproscan |
| GO:0031461 all species → | Cellular Component | cullin-RING ubiquitin ligase complex | Interproscan |
| GO:0031463 all species → | Cellular Component | Cul3-RING ubiquitin ligase complex | Interproscan |
FUN_012376-T2.
