Detailed information of FUN_012406-T1 in Colpophyllia natans

Genomic Location: contig_18:2583416...2592763
NR annotation: XP_020602176.1, plastin-3-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3V0K9Plastin-1 OS=Mus musculus OX=10090 GN=Pls1 PE=1 SV=1
A7E3Q8Plastin-3 OS=Bos taurus OX=9913 GN=PLS3 PE=2 SV=1
P13797Plastin-3 OS=Homo sapiens OX=9606 GN=PLS3 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001715DomainCalponin homology domainInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR001589Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan
IPR039959FamilyFimbrin/PlastinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19961FIMBRIN/PLASTINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005884Cellular Componentactin filamentInterproscan
GO:0032432Cellular Componentactin filament bundleInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan
GO:0051017Biological Processactin filament bundle assemblyInterproscan
GO:0051639Biological Processactin filament network formationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17276LCP1, PLS2; plastin-2-Exosomeko04147deepkoala

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