Gene detail

Detailed information of FUN_012409-T1 in Colpophyllia natans

Genomic Location: contig_18:2614274...2635499
NR annotation: XP_022782447.1, epidermal growth factor receptor kinase substrate 8-like [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

FUN_012409-T1

ATGCAGTCCTTAGATCCTTACAACTATGGAACTGACAGTGCCTGGGCTAGTCGAAATGGATCAGAGCCTAAGAAAAAtggTCCTGATAATGGAAGGCCCCCAAGTATGACCAATGGAGGTACTCCTGGAAGATCCCCCAAGAACTCACCAATTTTGGGGCAAGGCAAAGACCAGAGGAAAATGCCTGTCCAAGCTGCAAGTCAGTTTCCTGCAAGAACAAACTTCCTCCTGGAGCATCTTTCATCTTTCACTCTGACAACACCTCAAGAGGCTCAAGTCCCTGCCCGGGAAAGATTAAAGCAAACTAAGGAGTTGTTAGCCAAGGGTAATCAATGGACGAAAGAAATGGAAATGAGATTGACAGATACTGATGTCGTACTTTTAGACGGGGAGACACAGGATGTTGTTGAAGTGTTCTCATTGAACATAATCGGCCATGTTCACCACTTAAGTGACGATCCCGACTTGAACAGTGTGTTGGTATTCAACACAATacagacaaaagaaaaatttggtgCCATGCACCTGTTTCAGTCAGACAGAGTCCCGGCAGCAGTTGTGGCCACAGAAATAATGAAAGCTTCCAGCAGCAAATCAGCAATGCCCAATAGATTTGCATCAAGAGGAGGTGCAATACTACCTCCACCCCCTACCCATCCAGCACCCCCTCCTCCCACGGAAGTTGACCAAGAAAGGTTAGATCTCTATGAGAAATCCCTGGTGGCTCAGACCATTGCAGCATTTTCTGCAGTGCCTGATGATGGcacaaaaaaaacagcaaagccACAAGTTTCATCTAAATACCTGGCATCAGAATCATCCTCTGATAtccctgatgaaacactgtctgcAGAATTGTTGGAGGCACGAACAAACAGAGATGTGcaaATCTTAAACCACTGTATTGATGATATCGAGAGCTTAGTCCTGAGAACAAAAAGGTCGGCCGAAGCATGGaaaaaattgcagaaaaagaaaggaaaagtaaAACAAAATCAGTTGACACAAGAAGCTCGACCTCCTCCAGAGGCAGATTTTTATGATGCATTTCAGAAGTTAAAGCACGCCTTGAACTTGTTGGGAAAGTTGAGGCACCACATCCACAACCCCAACGCTGCTGAATTGGTTCATTATCTATTTGTCCCGCTCTCGTTGTTGGTTCGCTGTACTGGAGGTCCTGAGAAGGCCAGAGCCGTTGTGGCCCCCTTGCTTACTACACACGCTATAGACCTGCTGCAGAACTGCCTTTCATCTAAGGAAACCGACTTTTGGATGGCTCTGGGACCCAACTGGACATATCCAAAATCAAGCAAACAGTTTAAGGACCAGTTTATCTCTCCGTACACGCCTGTGTTTAAGGATGGATGGGTTCCACCAGAGGTGATTGCTGGTAAAGACGTGTCCAATCTAAGTGCAGCTATTGCTGCAAACGCTGCTAATGCTGCAGCTGTGGCTCAGTTAACTGATGGACAGCGAAAGGGTGAAGACTCTGCGGTAAATCTACAAGCTAATCCCGCAGTACTTTCAGCGGCGGCCAAGTTCAGACGACTGGCAAGCGTGAAGAAACCAGACGAAACTACACCAACAAGCCCGACGAAGAAGGGGTTGAGGAAAGTTCGTGTTCTCTTTGACTTCCAAGCAAGGAACAGCAAAGAACTGACAGTCCAGAAAGGAGAAGAAGTTGCcGTTCTTCTTGACAATCGTCAGTGGTGGTGTGTTAGGAATTCCGAGGGATCCATAGGCTTCGTGCCAAGTACAATCGTGGAAGAAGCAGTGGTTCTTCCCAGTCCCCCTACGACAGCTCCACCGCCTGTTCCAGTAACACAGGTGCATAAAATTGAGACGACATCCCAAACACCTCCATCATCACCATCACAGGCAGCCCGAGTGTCAGAGAGTCCAAAGATTCCTCATGTGGAACTGCGGCATGTTTCAATATCAAAGACGAACCGTCCTGTGTCCGCTCCTCCTATTCAGTTGGTGATTCCTCCACCCCCGGCTAGCCGTCCACCCCCCTCCACGCCTCCTCCACCCGCCACACCTCCTCCCCCTGTGGTTTTGAAGACGAATGGCACAACACTGCTAGAAGCCACTGTGTCTGGAGGTAATGATTTTGCCAAGGCCATCCAAGCAAAGAATCTTAAAAAAGTCGATCCTGAAGAGGAAAAGAAACGGCGTGAACAGTCTCAACAAAATAGAATGAGCTCAACTGACATGCTAAATGATGAACTTAAACGAAGAATGACCTCTAGTCAGGGTGGACTTACACCAAGGGTGCAACGGAAGGATTTGCCGACCGTTGACTTGACGGCTGATTCAAGCGCTAGTGAAGTCAAACGGTGGCTGGAAAGTAAAGGATTCACTGAAAGTTGTGTGACGGCATTATCTGGCAAGTCTGCTAAACACTTGGAGTCGATGACCAAGGATCAGTTAAAACAGGCTTGTGGGGATTCCGAGGGATCTAGGGTGTTCAGTCAGTTTGCTGTGCAGAAAGCTAACTGGGAGGCAATAAATAAAGGATCTGAACTAGCGTTCATAATGCAAAAACGTAAGGAGAGATCGGAAGTGAAAGCTACCGAGGAGCTGGGAAACGCTGGCGAACTCCGAAGCATTGTTGCCGACGCTAAAGCTGCAGCAGCTCAAGAAGAACTTGAATTCAGACGAAGAACCTCAAGCACAGGGaagaaaataattactattGGTGCACCTGCGACTAAACCACGCCCGAAGAGCTTTGCGGGACCTGAGACTATGCCGCGCAAGGATAGTAAGGCAGAACGAAAGTCATCCCGAGAGGATTCGTTTAATACCGAGTTCATCCCTCCGCCACCTCTACTGGATTCCGAAGAGCAGCCGACAAGTGGCGAAGCGAGTCCGACGGCGAGAAAGATTTCTTCTGAGGACGTGGAGAGTATTGTGCGAGAAcagaagaaacaacaagaacTCTTGTTGGAACACGATAAACAACTATTCCTTCTCGAGCAGCTTCAAAGACAAAAGTTAGAACTGGAACAGCAGAAACGAGAGTTTGAAGAACAACAACAGAGGGTGAAACAGGCGGAATTGCAGGAACAGCAGAAGGAGTTACATCGTCAAATCCAAGCACAGCAAGATCAACTGAAACTGAACGAGGACAAGCTAGTGCAACAGCAAAGATTTCTTTCAACCTACGAAAATGTCTCCCCTCAATTCACCTATGCGCAGCTTCCTCCTGTTGTGCCCCAGATGCCCGTTATGCCCATTGCGGGTGTCCCCACTGGGCCCCCCGCGTACCTTCCAATGGGAGGCCTTCAACCGATGTACACGCCGTACCCTTCCGCGAGGGCTCAACCCGGGGTGACACATGTGGTTCCTTCCGTGAACATGCCCTCGGTTTCAGTAACGCCGCCACCTGGCGCTGTACTGGCTGACAATACAACCAGAATGTAG

Transcript

FUN_012409-T1

Protein

Uniprot

Gene family

Uniprot term	Description
F1M3L7	Epidermal growth factor receptor kinase substrate 8 OS=Rattus norvegicus OX=10116 GN=Eps8 PE=1 SV=2
Q08509	Epidermal growth factor receptor kinase substrate 8 OS=Mus musculus OX=10090 GN=Eps8 PE=1 SV=2
Q5R4H4	Epidermal growth factor receptor kinase substrate 8 OS=Pongo abelii OX=9601 GN=EPS8 PE=2 SV=2

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07653	SH3_2	Variant SH3 domain	Domain	Interproscan
PF18016	SAM_3	SAM domain (Sterile alpha motif)	Domain	Interproscan
PF08416	PTB	Phosphotyrosine-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR013761	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR035462	Domain	Eps8, SH3 domain	Interproscan
IPR039801	Family	Epidermal growth factor receptor kinase substrate 8-like	Interproscan
IPR041418	Domain	SAM domain	Interproscan
IPR013625	Domain	Tensin/EPS8 phosphotyrosine-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12287	EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003779	Molecular Function	actin binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007266	Biological Process	Rho protein signal transduction	Interproscan
GO:0035023	Biological Process	regulation of Rho protein signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17277	EPS8; epidermal growth factor receptor kinase substrate 8	-	Exosome	ko04147	deepkoala