Detailed information of FUN_012525-T1 in Acropora pulchra

Genomic Location: ptg000008l:9602199...9610264
NR annotation: XP_029214013.2, uncharacterized protein LOC114977477 isoform X1 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9H4Q3PR domain zinc finger protein 13 OS=Homo sapiens OX=9606 GN=PRDM13 PE=1 SV=2
E9PZZ1PR domain zinc finger protein 13 OS=Mus musculus OX=10090 GN=Prdm13 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001858 (this species only)
Transcription factor familyzf-C2H2 · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21549
all species →
PRDM2_PRPR domain zinc finger protein 2, PR domainDomainInterproscan
PF13894
all species →
zf-C2H2_4C2H2-type zinc fingerDomainInterproscan
PF00096
all species →
zf-C2H2Zinc finger, C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036236
all species →
Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR050888
all species →
FamilyZinc Finger C2H2-type Transcription RegulatorsInterproscan
IPR013087
all species →
DomainZinc finger C2H2-typeInterproscan
IPR046341
all species →
Homologous_superfamilySET domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24406
all species →
TRANSCRIPTIONAL REPRESSOR CTCFL-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005694
all species →
Cellular ComponentchromosomeInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0043035
all species →
Molecular Functionchromatin insulator sequence bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_012525-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP