Gene detail

Detailed information of FUN_012528-T1 in Acropora pulchra

Genomic Location: ptg000008l:9646273...9663597
NR annotation: XP_029214011.2, MORC family CW-type zinc finger protein 3-like isoform X2 [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

FUN_012528-T1

ATGGCGACTGGTTCTTCGGTTGATTCTCCGGATGCGGGAGTCCGACTAAGCACTCTCAGCCCAAAGTATTTACACACTAATTCGACAAGTCACACTTGGCCGTTCAGCGCCATCGCCGAACTCATCGACAATGCCTACGACCCGGATGTCAATGCAAGTCAGCTTTGGATTGATGTAAAGAAATACCCCAAACACAACTACTGCTTGGTATTCACCGACTATGGTGCCGGCATGGGCCCGGAGAAATTACACAAAATGCTTAGCTTTGGTTTCTGTGATAAGGTGGCTAAAAAGGGACAACATATGCCAGTGGGTCATTACGGCAATGGATTTAAATCGGGATCCATGCGACTTGGACGAGATGCAATTGTCTTCACCAAAAACGCCAATTCCAAAAGCGTTGGGTTTCTTTCGCAAACCTACCTGGATGCCATCAAAGCTGAAACTATTCTCGTACCAATGATTACTCCAAAGTCTGACAAAGAGAAGGCATTGAAAGACATTCTGACTTACTCAATTTTTCGACGTAAAGAAGAACTATTAGCAGAGTTTGCGACTATTCAGAATCCTAGTGGGACGCGCATCATCATATTTAATGTCAGAACAACCCCAGATGGTAAACCAGAGTTTGATTTCAGTATTGATGATGATATAAGAATTCCTAAAGATACAGATGTGGCCATCACTAAACTTAAAAGGCAGGAGAGACAGAATCACATTCCGGAGTCTGATTACTCTCTAAGGGCATACTGTGCAATTTTATACCTGCGACCAAGAATGCAAATTATGTTGAGGGGTAAAAAGGTCCGCACAAGTGTGATAACTAAGAGTTTGAGTAAAACAGAAGTGGACACTTACCGGCCATCTGTGAGGGAGAACACTCCAGTAATTCCAGCCAATGTTAATAAAGCAGTAAAGATCACTTTCGGTTTTAGCCAAAACAGAAATCACTATGGAATCATGATGTATCACAGAAATCGGCTTATAAAGCCATATGTTCGTGTTGGTTACCAGCTTCGAGCAAATAACTTGGGGGTTGGGGTTGTTGGTGTGATTGAATGTGATTTCCTGCAGCCAACTCATAACAAACAAGACTTTGATTATACAAAGGCATACAGGGCTTGCATTGCTGCTTTGGGAAACAAGTTAAATGACTACTGGAATGAGAAGAAGGGTCCTCAACGAGCCAACAGCAAAGAGCCCATACCAGAGCCAGTAGAAGTTCAGCAGGGTCCTGACCAGAGCTGGGTGCAGTGTGACAATCTGGATTGCCTGAAGTGGCGCAAGTTACCTGATGGTACAAACCTTGAGAAACTTCCTGACAAATGGTACTGCCAAGACAGTCCATACCCACACATGAGGTCATGTGATATTCCAGAAGAAAAGGAGGATGAAATTGAACAGCCTTATGTCAAGACACAAAAGAAAAGATTGGAAAAAGAGATGGAAGACAGGAAAAGAAAGGAAAAGGAAGCCAAGCAAAATCAAGAGGAAGAGGCAAAACGACTAGAACAGCAACGCAAAGAGCTAGAGAAAAAAGAAGTAGAGTTGGATAGACTGAAAAAGCAACTGTCAGAGATGCAGTCTACAAGTGAATCAGCAATATTACAGTCCATTGAAGCAAACAGTACAAGACAACAACAAGCTATCCAACAGCAAATAAAGGGGGAGAAAAAGTCACCACAGCCACTGCGAATCAAGGTTGTAACACAACCTCCAAGTGTTTCAAGGTCAACTGCTGGAGTCCCAGTCACCCAGTCGTCAAATTTGACTCGGAGTGTATTGGCGACGTCAAGCAATACCATTAAAAATGGACCACTCATTTTGCCATCTAGTAACAGTAACCAACAGCCAACAGTTAAAGTGGTCAAGGTTTTCTCCTCTGTCCCTGCTCAAAGTCATACACAAGCTGTGTCTGGCAAGCCATTGGTACAGATAGTTCCCAATCCTCAAGGACACATAGCGCGGCCAAACCATGTAGTAGCAGATTTGACAACACCAAAGGTCGTGTCAGTGCAGTCTTTGCAATCAGCGTCTGTCGCCAGCGGTGTCACATCTCAAACACCACAAAAGAAAGTCACCGTACAAAATCTTGTATTGCAGTCAGGTCATAAAATTCATCTGCAAACGCCTGTTTCGCAGGTTGGGAGTCCTGTTTCAAACCGCTCGCCGCAGTACCAAGTGAAATCTGTGACAGTTCAGGCGGCACAGGCACCGCAACAAATTCAGTCAGCTTCCAATGCAGGGGTAGCATCCTTGATCTCACAAAATCAACTTCCGTCTCAGCAAACCAACTCACCACTCAAGTCGGCATCTTTGTCAACTATCTACAAACCATTAGAATCGTTACAAGAGGTAAATATAAAACAGGAACCACAACGCACTGCGTCATCATCAACAGACTCAAATATGCAGACAACTCAGGTGCATTATGGGGCAGAGGCAGCAGCTTCAAGTACTCCTCAACCAATCAAAATCAAAATTGAAAAGATTGACAGACCCCAAGTCAATGGCATCAAGAGGGCACATGGAGAGGACAGTGACGTCATTGAGCAACCTCCGAAACAGAAACCTCGCCAAGAGAGGGAAGTTATTATCATTGATGATCCCCCATCTCCTACAATAAAAAAGAACTTCACACCGCAAATTCGACATGAACTTGACTTGAAGGATGTTGACAACGATTTGATAACAACTTTGCGGAAACTGAGTCCTGAAGAGCAGTGGATAAGGCTAGCCAAATCTGCTCAGCAACTTCGCTGTCTTCGCGACGATGTTTGCAAACTGCTGCGAATTTTAGTGCCAGAAATTGAACTTGGAGAAAGAGCAGAAATACTTGACAACACAACAGTTGATGATCTGTTAAAACAAGTTTTAGAGGCCAACGTAAAACCCACGAACAGTGAGTCGTGA

Transcript

FUN_012528-T1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q14149	MORC family CW-type zinc finger protein 3 OS=Homo sapiens OX=9606 GN=MORC3 PE=1 SV=3
F7BJB9	MORC family CW-type zinc finger protein 3 OS=Mus musculus OX=10090 GN=Morc3 PE=1 SV=1
Q8TE76	MORC family CW-type zinc finger protein 4 OS=Homo sapiens OX=9606 GN=MORC4 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003253 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07496 all species →	zf-CW	CW-type Zinc Finger	Domain	Interproscan
PF13589 all species →	HATPase_c_3	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan
PF17942 all species →	Morc6_S5	Morc6 ribosomal protein S5 domain 2-like	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011124 all species →	Domain	Zinc finger, CW-type	Interproscan
IPR045261 all species →	Family	MICRORCHIDIA ATPase family	Interproscan
IPR036890 all species →	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR041006 all species →	Domain	Morc, S5 domain 2-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23336 all species →	ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3.	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0035064 all species →	Molecular Function	methylated histone binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24135	MORC; MORC family CW-type zinc finger protein	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.