Genomic Location: ptg000008l:10024919...10062449
NR annotation: XP_029187206.2, histone-lysine N-methyltransferase PRDM9-like [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families
| CDS |
| FUN_012571-T1 |
| Transcript |
| FUN_012571-T1 |
| Protein |
| FUN_012571-T1 |
| UniProt accession | Description |
|---|---|
| P0C6Y7 | Histone-lysine N-methyltransferase PRDM9 OS=Rattus norvegicus OX=10116 GN=Prdm9 PE=3 SV=1 |
| Q96EQ9 | Histone-lysine N-methyltransferase PRDM9 OS=Mus musculus OX=10090 GN=Prdm9 PE=1 SV=2 |
| Q9NQV7 | Histone-lysine N-methyltransferase PRDM9 OS=Homo sapiens OX=9606 GN=PRDM9 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000194 (this species only) |
| Transcription factor family | zf-C2H2 · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF21549 all species → | PRDM2_PR | PR domain zinc finger protein 2, PR domain | Domain | Interproscan |
| PF00096 all species → | zf-C2H2 | Zinc finger, C2H2 type | Domain | Interproscan |
| PF13465 all species → | zf-H2C2_2 | Zinc-finger double domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013087 all species → | Domain | Zinc finger C2H2-type | Interproscan |
| IPR036236 all species → | Homologous_superfamily | Zinc finger C2H2 superfamily | Interproscan |
| IPR001214 all species → | Domain | SET domain | Interproscan |
| IPR046341 all species → | Homologous_superfamily | SET domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14003 all species → | TRANSCRIPTIONAL REPRESSOR PROTEIN YY | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0000790 all species → | Cellular Component | chromatin | Interproscan |
| GO:0000978 all species → | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0000981 all species → | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0005667 all species → | Cellular Component | transcription regulator complex | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0031519 all species → | Cellular Component | PcG protein complex | Interproscan |
FUN_012571-T1.
