Gene detail

Detailed information of FUN_012602-T1 in Dendrogyra cylindrus

Genomic Location: contig_18:5151826...5162768
NR annotation: XP_020603215.1, uncharacterized protein LOC110042211 [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P32018	Collagen alpha-1(XIV) chain OS=Gallus gallus OX=9031 GN=COL14A1 PE=1 SV=2
Q05707	Collagen alpha-1(XIV) chain OS=Homo sapiens OX=9606 GN=COL14A1 PE=1 SV=3
Q80X19	Collagen alpha-1(XIV) chain OS=Mus musculus OX=10090 GN=Col14a1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01391	Collagen	Collagen triple helix repeat (20 copies)	Repeat	Interproscan
PF00229	TNF	TNF(Tumour Necrosis Factor) family	Domain	Interproscan
PF00092	VWA	von Willebrand factor type A domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR008160	Repeat	Collagen triple helix repeat	Interproscan
IPR006052	Domain	Tumour necrosis factor domain	Interproscan
IPR008983	Homologous_superfamily	Tumour necrosis factor-like domain superfamily	Interproscan
IPR002035	Domain	von Willebrand factor, type A	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11471	TUMOR NECROSIS FACTOR FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005164	Molecular Function	tumor necrosis factor receptor binding	Interproscan
GO:0006955	Biological Process	immune response	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan