Detailed information of FUN_012614-T1 in Dendrogyra cylindrus

Genomic Location: contig_18:5281694...5313347
NR annotation: XP_020603204.1, RANBP2-like and GRIP domain-containing protein 2 isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
H2QII6E3 SUMO-protein ligase RanBP2 OS=Pan troglodytes OX=9598 GN=RANBP2 PE=1 SV=1
P49792E3 SUMO-protein ligase RanBP2 OS=Homo sapiens OX=9606 GN=RANBP2 PE=1 SV=2
Q9ERU9E3 SUMO-protein ligase RanBP2 OS=Mus musculus OX=10090 GN=Ranbp2 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|NZF

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00638Ran_BP1RanBP1 domainDomainInterproscan
PF00641zf-RanBPZn-finger in Ran binding protein and othersDomainInterproscan
PF12185IR1-MNup358/RanBP2 E3 ligase domainDomainInterproscan
PF13634Nucleoporin_FGNucleoporin FG repeat regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000156DomainRan binding domainInterproscan
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR045255FamilyRan binding protein RanBP1-likeInterproscan
IPR036443Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR022011DomainNup358/RanBP2 E3 ligase domainInterproscan
IPR025574RepeatNucleoporin FG repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23138RAN BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046907Biological Processintracellular transportInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

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