Genomic Location: contig_10:1832813...1836425
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families
| CDS |
| FUN_012638-T1 |
| Transcript |
| FUN_012638-T1 |
| Protein |
| FUN_012638-T1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01423 all species → | LSM | LSM domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR047575 all species → | Domain | Sm domain | Interproscan |
| IPR001163 all species → | Domain | Sm domain, eukaryotic/archaea-type | Interproscan |
| IPR027078 all species → | Family | Small nuclear ribonucleoprotein E | Interproscan |
| IPR010920 all species → | Homologous_superfamily | LSM domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11193 all species → | SMALL NUCLEAR RIBONUCLEOPROTEIN E | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003723 all species → | Molecular Function | RNA binding | Interproscan |
| GO:0000387 all species → | Biological Process | spliceosomal snRNP assembly | Interproscan |
| GO:0000398 all species → | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0005681 all species → | Cellular Component | spliceosomal complex | Interproscan |
| GO:0005682 all species → | Cellular Component | U5 snRNP | Interproscan |
| GO:0005685 all species → | Cellular Component | U1 snRNP | Interproscan |
| GO:0005686 all species → | Cellular Component | U2 snRNP | Interproscan |
| GO:0005687 all species → | Cellular Component | U4 snRNP | Interproscan |
| GO:0034715 all species → | Cellular Component | pICln-Sm protein complex | Interproscan |
| GO:0046540 all species → | Cellular Component | U4/U6 x U5 tri-snRNP complex | Interproscan |
| GO:0071011 all species → | Cellular Component | precatalytic spliceosome | Interproscan |
FUN_012638-T1.
