Genomic Location: contig_18:5825963...5831418
NR annotation: XP_020601502.1, E3 ubiquitin-protein ligase RNF13-like [Orbicella faveolata]
Species abbreviation DCYLI · all data for this species · gene families
| CDS |
| FUN_012656-T1 |
| Transcript |
| FUN_012656-T1 |
| Protein |
| FUN_012656-T1 |
| UniProt accession | Description |
|---|---|
| Q0VD51 | E3 ubiquitin-protein ligase RNF13 OS=Bos taurus OX=9913 GN=RNF13 PE=2 SV=1 |
| O43567 | E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens OX=9606 GN=RNF13 PE=1 SV=1 |
| Q5RCV8 | E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii OX=9601 GN=RNF13 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0005639 (this species only) |
| Ubiquitin family | E3|E3 activity RING|RING · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13639 all species → | zf-RING_2 | Ring finger domain | Domain | Interproscan |
| PF02225 all species → | PA | PA domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 all species → | Domain | Zinc finger, RING-type | Interproscan |
| IPR051653 all species → | Family | E3 ubiquitin-protein ligase and sorting receptor | Interproscan |
| IPR003137 all species → | Domain | PA domain | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47168 all species → | RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED | Interproscan |
FUN_012656-T1. This gene does have a gene model — the search simply returned no hit.| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K15692 | RNF13, RZF; E3 ubiquitin-protein ligase RNF13 | EC:2.3.2.27 | Ubiquitin system | ko04121 | deepkoala |
