Gene detail

Detailed information of FUN_012662-T1 in Siderastrea siderea

Genomic Location: contig_10:1979793...1986990
NR annotation: no NCBI-NR hit recorded
Species Siderastrea siderea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03638 all species →	TCR	Tesmin/TSO1-like CXC domain, cysteine-rich domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005172 all species →	Domain	CRC domain	Interproscan
IPR028307 all species →	Family	Lin-54 family	Interproscan
IPR033467 all species →	Domain	Tesmin/TSO1-like CXC domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12446 all species →	TESMIN/TSO1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_012662-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.