Detailed information of FUN_012674-T1 in Acropora pulchra

Genomic Location: ptg000008l:11183385...11185548
NR annotation: XP_015756245.1, PREDICTED: RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6NRQ7RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Xenopus laevis OX=8355 GN=ssu72 PE=2 SV=1
Q5ZJQ7RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Gallus gallus OX=9031 GN=SSU72 PE=2 SV=1
Q9NP77RNA polymerase II subunit A C-terminal domain phosphatase SSU72 OS=Homo sapiens OX=9606 GN=SSU72 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006544 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04722
all species →		Ssu72Ssu72-like proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006811
all species →		FamilyRNA polymerase II subunit AInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20383
all species →		RNA POLYMERASE II SUBUNIT A C-TERMINAL DOMAIN PHOSPHATASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004721
all species →		Molecular Functionphosphoprotein phosphatase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005847
all species →		Cellular ComponentmRNA cleavage and polyadenylation specificity factor complexInterproscan
GO:0006369
all species →		Biological Processtermination of RNA polymerase II transcriptionInterproscan
GO:0006378
all species →		Biological Processobsolete mRNA polyadenylationInterproscan
GO:0006397
all species →		Biological ProcessmRNA processingInterproscan
GO:0008420
all species →		Molecular FunctionRNA polymerase II CTD heptapeptide repeat phosphatase activityInterproscan
GO:0070940
all species →		Biological Processobsolete dephosphorylation of RNA polymerase II C-terminal domainInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15544SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72EC:3.1.3.16
Messenger RNA biogenesisko03019deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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