Detailed information of FUN_012743-T1 in Colpophyllia natans

Genomic Location: contig_18:6235513...6250261
NR annotation: CAH3030983.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0A2R8QF68Glutamate receptor ionotropic, kainate 2 OS=Danio rerio OX=7955 GN=grik2 PE=3 SV=1
Q91755Glutamate receptor ionotropic, kainate 2 OS=Xenopus laevis OX=8355 GN=grik2 PE=2 SV=2
P39086Glutamate receptor ionotropic, kainate 1 OS=Homo sapiens OX=9606 GN=GRIK1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01094ANF_receptorReceptor family ligand binding regionFamilyInterproscan
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015683FamilyIonotropic glutamate receptorInterproscan
IPR001508FamilyIonotropic glutamate receptor, metazoaInterproscan
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR001638DomainSolute-binding protein family 3/N-terminal domain of MltFInterproscan
IPR001828DomainReceptor, ligand binding regionInterproscan
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18966IONOTROPIC GLUTAMATE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0008066Molecular Functionglutamate receptor activityInterproscan
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0035249Biological Processsynaptic transmission, glutamatergicInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan
GO:0050804Biological Processmodulation of chemical synaptic transmissionInterproscan
GO:0098839Cellular Componentpostsynaptic density membraneInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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