Detailed information of FUN_012798-T1 in Acropora pulchra

Genomic Location: ptg000008l:13014244...13022369
NR annotation: XP_015751338.1, PREDICTED: uncharacterized protein LOC107331280 [Acropora digitifera]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P98160Basement membrane-specific heparan sulfate proteoglycan core protein OS=Homo sapiens OX=9606 GN=HSPG2 PE=1 SV=4
Q05793Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001081 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00052
all species →		Laminin_BLaminin B (Domain IV)DomainInterproscan
PF13385
all species →		Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000034
all species →		DomainLaminin IVInterproscan

 PANTHER
No PANTHER signature was detected for FUN_012798-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
No Gene Ontology signature was detected for FUN_012798-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_012798-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP