Gene detail

Detailed information of FUN_012843-T1 in Dendrogyra cylindrus

Genomic Location: contig_19:1717658...1725434
NR annotation: KAJ7365220.1, hypothetical protein OS493_007872 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

FUN_012843-T1

ATGGTAAAGTCGTTTGCAGCAGTTGCTTCAGTGGTGATTCTTGTAAAGTGTAAGTGTACCATGAAAGTTGGCGTCGTGATATCGTTGGTCCTTTGCTGTAGCATACTGGCAAATGGCACAGCCGAGTTTCTAGTGGACCCGGCTACTGACCTCGTGGAGATATTCGGAGATATTGATGACGATATGCTGGTCGAAGATTTCTTGGAGGATTCATCTGGAGTTAGTCCGTGTGCCGTCAACCCGTGCCAAAATGGAGGAGAGTGCCTCCCTATCGCAGCTGGCGATTTTACTTGCAAATGCCTCGACGGATACCATGGAACAACTTGTGAAAAAGAAAATCCCTGTGCCAAGAACCCATGCCAGAATGATGGAAAGTGTTCTGCTATCGCCGGCGATGAATACATTTGTCAATGCGCAGAGGGATTCGGTGGAGACAATTGCGAAAAAGATATTGACGAGTGTGAAACTGAAAACCCTTGTCTGAATGGAGCAACTTGTACAAATCTCCCTGGAAGTTACGAATGTTCCTGCAGTTCGGGTTATACTGGAGAAAACTGCCAAGAAGATATCGATGAATGCCTGACTTCTAAACCTTGCGCAAATGGAGCTGCTTGTGTTAATGAGCCTGGAAGCTACACATGCACATGCCTGCCTGGTTACAGCGGAAAAAAATGCGAGAAAGATGTGGATGAATGTTTAACCTCAGTACCATGTCAAAACGAAGCCACATGTATGAACATCCCTGGAAGTTATATCTGTATATGCCAACCTGGATTCACGGGAAAAACTTGCGACACTGATATAAACGAATGCCAAACTACGAAACCTTGTCAAAATGGGGGAACTTGTGAAAACTTACCTGGAACTTACAAATGTATCTGCAAAACAGGCTATACAGGAAAAGACTGCCAGAAAGATATCGATGAATGTTCCACCTCCAGTCCCTGCCAGAACGGAGCTACTTGTTTGAACAACCCTGGAAGTTACCGCTGTACATGCCAACCCGGTTTCACTGGACCAAACTGCAGAGAAGACATCGACGAATGCACAGTTAAGAATGGAGGGTGCTCCCACGACTGTACCAACACGATTGGAAGTTACGAATGTTCATGCCCAGACGCTGAACTATCATTGGATGACGATAAACATACTTGTGAAGCTCAAGGAGTCATCATTAACTGCCTTCAAAACGAGATGTCCATTACTATTCCCAAGCGCATACTCAAGGGAATAGACCGAGAACATATCCGCCTCCTGGACCCAAAATGCAAAGCAACAGAAACTCGCACGCACTTCAAACTCAAAACACCGCTGACCGGATGCAACAACACACGCAGATACACAAAGTCTGCAATTGTGTACAGCAATAAAGTCCTGGAGATTCCACTGAGAAACACAGACATCATCACACGCGTCAGAGAGATTGAGATCCCTTTCAGTTGTTATTATTCCAACTATGGAGTGGCCACAGCCGTTGGATTAAAACCAAGCAATAGAAAATTGGTGTTCTGGGAAAAAGGAAGTGGAAACTTCACCGTTTTCCTGGAATTATATCACAGTGACAGATTTACCAACACCTATAGCCAACAGGAATTTCCTGTGACCTTAAAACTCCGCCAACAGATGTTCGTCCAAGGCAAAGTTGAAACTGATGACAAACGGCTGTCGATCATGGCTGAGAAGTGCTTCGCTACGCCAACACCTGACGAAAAGAGTCCAAAGAAACACGATCTACTGATTGACGGCTGCGCGGTTGATGACACAATAAAATTGCTGTCGGCGCCAACAGGCTACTTCCGCTTTACCTTAGAAGCCTTCGAGTTTATCAAGCAGCCGTTCGTGTTCATTCACTGTCACGTGATCATCTGCAATGCATCCAACACCCAGTCCAGATGTGCTAAGGGATGCGAGTCAAATGCCCGATTAAGACGAGACGTCGGAGACCACAAGGTGTATTCTCTAGCACAAGGACCTATAGCCCTGGATTACACGAACGAATACGAAGAGGACGATGAACATCTTAGTGACGAACAATCCGAAACGGAAGttgagttAAACTTGCCACTTGTTGCCGCCATGGCTGCCATGACAACCCTGAGTATCATTGGTGTCGCATTCATGGCAGCTCGAAACAGACCATGTGGTGTTGACCATCCAtcaataaagaaataa

Transcript

FUN_012843-T1

Protein

Uniprot

Uniprot term	Description
G8HTB6	ZP domain-containing protein OS=Acropora millepora OX=45264 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00100	Zona_pellucida	Zona pellucida-like domain	Family	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR042235	Homologous_superfamily	Zona pellucida, ZP-C domain	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR001507	Domain	Zona pellucida domain	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12916	CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005112	Molecular Function	Notch binding	Interproscan
GO:0007219	Biological Process	Notch signaling pathway	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan