Gene detail

Detailed information of FUN_012883-T1 in Colpophyllia natans

Genomic Location: contig_19:1278342...1280259
NR annotation: XP_020619736.1, homeobox protein notochord-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
O93366	T-cell leukemia homeobox protein 1 OS=Gallus gallus OX=9031 GN=TLX1 PE=2 SV=1
O43711	T-cell leukemia homeobox protein 3 OS=Homo sapiens OX=9606 GN=TLX3 PE=1 SV=3
O55144	T-cell leukemia homeobox protein 3 OS=Mus musculus OX=10090 GN=Tlx3 PE=2 SV=2

Gene family	Subfamily
Transcription Factors Family	Homeobox

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR001356	Domain	Homeobox domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR050848	Family	Homeobox domain-containing transcription factors	Interproscan
IPR020479	Domain	Homeobox domain, metazoa	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24333	HOMEO BOX HB9 LIKE A-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan