Gene detail

Detailed information of FUN_012889-T1 in Acropora pulchra

Genomic Location: ptg000008l:14199960...14245702
NR annotation: XP_015773004.1, PREDICTED: dihydroflavonol-4-reductase-like isoform X1 [Acropora digitifera]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_012889-T1

GCAAGGTCTCTCTTCCCAATTATCCTCCAAAGTGAAAAGAAGGCCACGCCACCAGGTATTATTGATGACTCGTGTTTTAGTCACAGGCGCATCTGGCTTCCTTGCAAGCCATATTGTGCTTCAGTTGCTCGAACGCGGAGACTATATGGTACGTGGAACGGTTAGAAGTCTTAAAAATGACAAGAAAGTAGCACCTCTGAGAAACTTGAAGCTTGAAAATGGAACATACGAACTGGAGTTGGTCGAAGCTGATCTCACGAATAAGGAATCGTGGACAGAGGCTGTCAAGGACTGCACCTTTGTAATTCATGTTGCTTCACCATTTCCTGCTGAGCGTCCAAGAGATGAAATGGAAGTAATTAGACCAGCAGTGGAGGGAACTAAAAATGTCCTTGAAGCTTGTGCAAAGACAAAGGGAGGAGTAAAGAGAGTTGTATTAACAAGCTCAACTGCTGCAATTTGTGGTGGAAGATATGATGAAGGCATAGTCTTTTCAGAGAAAGAATGGGCATCAGAGGAGGCTTCTTCCCCTTATGGGAAGAGCAAACTCCAAGCTGAGAAAACAGCCTGGGAACTAGTTGAGAACTTACCAGATGATGAAAAGTTTGAGCTTTGCACCATTAATCCTGGATTTATATTGGGGCCTATACTTCAAGGAACATTGTGCACAAGTATGGAGTTGCACCAACGATTTCTTCAACGGGAAGTTCCAATGGTTCCAAATTTGTGCTATCCAGCATGTGACGTTAGAGATGTTGCAGGTGCACATATAACAGCAATGACATCACCAACAGCTCCTGGTAATAGGTTCATGACAGTGACAGATTCTTTGTGGATTCCAGAAATGGCAAAAATTTTGGACGAGGAATTCAGACCTTTGGGTTACAATGTACCCACACGAGTAGCTCCAAACTTTGTATTGAGAATCTTAGGTCTCTTCAGTGGCTCTGTAAAAATGATTCTGCCCTCCTTAGGATGTGAGCAAAAATTTGACAACTCAAAGGTCAAACATCATCTGCAGTACAAAGCAACGGAGCTGAGAACCAGCATAATAGACATGGCATATAGCATGATTGATAGGGGTTTCATCTACAAGACTTTACAATACCAGGAAAAGAAGGCACAATAGGACCATCGAAATTAAGTTGCTGACTGCGCGTGTGGTTGTTTTCCTTTTGGCTCTAACTTGCCATTTTGGTGTTGCTATAATTGTTATATTTCGTACAAATGATAAACAACGACACTTATTCTTTGTTGCAAGAGAAATTCCTTACACGCCTGTTAAATGTTGATTCTGTTTCTTACACCTCTAGTACAATGTTGTATCTGGATTGAGTTTCAGTCGATCTCAACCTGACTTAGAGGGTTTCCTCCGGGCACCCCGGTTTCTTCCCTCCTCAAATTGACTCCTAAAAAAATTGACTAACTATTATGATCTCTACTGGTGCTTCAAATTAATTTGCAGGACCCCATTGATAACAGTACATTGTACTGAAGGGTTATCCTGGACAAATATTATATGCCTTACATAAAAGTAGTTGTTTTTTTTTTCCGAACTCCAGTGCTTTTGCCTTTCCAAATGGCTTTGGAGAATGTTTGCCTCCCAAAAACAGTTTTTTTCTAAAAGCTAAAATTACTTGTCCATTAATTGTCTATATGTCATGATCATAAGTGTTCAGTTCCTGAATTCGAGTTCTTGCGGCCACTGTTGCATCCCGTCTTGGTCTGAAATGTGGCGCCGTAGGGTTTAATTGTACAGAAGGAATGCTTGTGGCTATCTCCCTGGCGCCGTCACAAGTCAACTCCAGCGGGTAAACGTGTTGAGTAGGACATTCCAATGTTCCGTGTACGGTCTTAAGTTCAACAGCACGGACAATACCATCTTTCCCAGGGTAAATTCCAGTCACAACTGCACGTGGCTAGGTTCCACGGTTCTTGTTGTCAGTTTTGATAATGACCACATCTCCGACCTTGGGTTGAAACTTGCTTGCTTTATGAGTTAAGTTGTGACGTTCCCTCTAGTCAGGTCGCTTAGCGTCAGTAGGGAACTTAAGCAACCACGACGAAAGGGACGACGACGACGTCAAGTAATCGCGGAGGGTCTGGAACGAGGACGGCGTTTCTGGCGAGAAAATGAAACTTAAGCAGTTGTTCAAGGACGACGACGTGTGAATTCTTGTCTATTCTTGCTTCGTCGGTTAAAAAAAAAGGCATCGTTCAGTGACGTCCAAAATCATCTTCTTCTCAGTCATGGATCAAATTTCGTTCAAGATGATGAGTTCTTTCTCCTTCTCTAGAACTCCTCTGGAAGAGCATCAAGCTCCGAAGTTTCCACATCAATACCAGTGGTTTTCTCCTCCATCGTCAATTTAGCTTGCATTCTCTTAGTTAGTAAGTTATACCGGTGACGCACAGACCGCGCTGTAACTCAACTTTAGGGATGGCAATGCGTTTAAATTCTCTGGTATTGATTCCATGCCAGGCCTCTTTCGGTACTTCTCATTTTAAAACGGTACGGTTCTTCTACGAGGGCTTTGCCGCACATTGCTATGTGGTAGTCACTATTCCAAACAAAGTTCGGATTTCTGCCAAAGTATAAATAAAAGAGCTTTCAGATTGTAGAGTGCTAGTAAAATTTTAAAATTCGAGACATTTGGCTGTAAAACGGTATCTAATTCTGCAGGAAAATTTCCACCTATGTATCGAAAGTTCGAGCGTTGGTTATTCAATTCTTGAATATATCAACAGCCCAAGAAATTGTCAAGCCTTAGCTTTATTTACAATAACATACGAATGGCAAAAGGTAAAAATATTGAATTTTACGGAAATTATTTGAGATTTAAATTCAGTTCTAAGTGTCGCTGATATAAACAAACCTATTAGATTTGCCTATTTTCAATATGCTTCAGCCTGATATGTTCTACATTTGATGCTCCTTCCTTTAGCGAGCAAACGAATCAAGTCTGTCAATTTAATCAATTCTAGCTAGCGCTCGGCACTGATAGCAATCGTCGCGCTTCAAACAAGAATACTATTTTTCCCGTGTTATTTTGTCATAACAATTTTTATGGGTGTAAATCTATATCAAACATTTCGAAAATAGATTCGCAAAACCTGAAAGGTTATAAAGCGTCTCGATTGAAGGACAACAAAGCGCAAAATATTTTAGTAGCAATAATCCGGCAGTTTCCCACACAGCTTTTGACCGAACGCAGAGGTGTATTGTACTGCCTTTTAACACTTTTCACTCGATAAAAATGAGCTCAGCTCTTTCATTAAATATACTCAAATAAATCTTAGGTGGTCGCTTTCACCGCTTGTTCGGAGGATGGAAAATGAGTAAGTGAGTTTCAGAATTTTATATCTCTTAAGAGAAATGCACAGGGACGTTGAAATCACCCGAAGAAGCGAATAAGAACTCCAACCGGTCATAGACTGTAAAAAAAGACAAAAAACACGCACCTTTTAATGAGAAAAACGGCTTTGAAGTTCGGAAGATCACGACGACGTGAAACAGCTCTTTCTCAAGTCGTCGACGACAAGACGACGACGAAATTCTTGGTTCGCACCTGCGTAGTGACCTTCACTTTACTTCCGGTCGTCGTCCTCCCGTTCGTCGTCCTCTTGTTCGTCGTCGTGGTTGCTTAAGTTCCCTAGTATCTTGACTGGCCGGATACAAGCACCAATTTTTCTATGCACTCTTTTTTCCATGTAAGATTAAAATTTAGTCGTGGATCCATCGAAAATATTTCCTCTATCTCATGGATCCACGGAGAAAATTGTTTAATAGTAATTAAGGGAACAATCTTGTGATTTTGATGCTTGTTTCCGCTGTGTAACGTTTCCGCGAAAATTTGGAGTTAAGAGGGCTGACTACTTAGAGCCGTCAGATACTCTCTTTTCCACTGTCTCCACAGGTTATCCTTGCAGATTTTGCCCGTTTGCGGGAGTCCCGATCTATGATTCGCCATGTTTCCTGCTGCGGTAGCTCGCTTGTTCGCTGGAACAAGAATGTTGAGGGGGTGAGAATCGATTGATCCAGCGAGATCTGTCCCAATGACTTCAAGTGCTGTGCAACTGTAGTGCGATCCTCCGGGAGTAGACCTGGTATTGGAGGGGAGAACGGTGTGGTGATGCCTGCAAACGATTTTGGAAGAACAAGTACTTCAGGGAATTATGATCCTACCACTTTAGCCTACTCAAATTTGGTGGCCACAACTGCTGGAAATGTTAATTGAGATCCCATTTGTCTTGCCGAAGCAGGGGGACCTTATTTCGCTATCACACACTAAACTCCTTAAGGAGGATATTGACTATGCTGGCATCTCTATTGCCTGGCAATCCATCCAGGATAGAGGAATTTCAGAGGCGGCTGCTAAGCTCATC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P53111	NADPH-dependent aldehyde reductase ARI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ARI1 PE=1 SV=1
Q03049	Putative uncharacterized oxidoreductase YDR541C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YDR541C PE=3 SV=2
P53183	Putative uncharacterized oxidoreductase YGL039W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YGL039W PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002390 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01073 all species →	3Beta_HSD	3-beta hydroxysteroid dehydrogenase/isomerase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050425 all species →	Family	NAD(P)-dependent epimerase/dehydratase-related protein	Interproscan
IPR002225 all species →	Domain	3-beta hydroxysteroid dehydrogenase/isomerase	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10366 all species →	NAD DEPENDENT EPIMERASE/DEHYDRATASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0003854 all species →	Molecular Function	3-beta-hydroxy-delta5-steroid dehydrogenase (NAD+) activity	Interproscan
GO:0006694 all species →	Biological Process	steroid biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for FUN_012889-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.