Gene detail

Detailed information of FUN_012922-T1 in Colpophyllia natans

Genomic Location: contig_19:1906538...1916537
NR annotation: XP_020628450.1, ryncolin-2-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
D8VNS7	Ryncolin-1 OS=Cerberus rynchops OX=46267 PE=1 SV=1
D8VNS8	Ryncolin-2 OS=Cerberus rynchops OX=46267 PE=1 SV=1
D8VNS9	Ryncolin-3 OS=Cerberus rynchops OX=46267 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12661	hEGF	Human growth factor-like EGF	Domain	Interproscan
PF00147	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR014716	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR013032	Conserved_site	EGF-like, conserved site	Interproscan
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12916	CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005112	Molecular Function	Notch binding	Interproscan
GO:0007219	Biological Process	Notch signaling pathway	Interproscan