Gene detail

Detailed information of FUN_013099-T1 in Dendrogyra cylindrus

Genomic Location: contig_19:4954160...4963222
NR annotation: XP_020604826.1, ribosome biogenesis protein WDR12 homolog [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
A7RHG8	Ribosome biogenesis protein WDR12 homolog (Fragment) OS=Nematostella vectensis OX=45351 GN=v1g82024 PE=3 SV=1
Q6NX08	Ribosome biogenesis protein wdr12 OS=Danio rerio OX=7955 GN=wdr12 PE=2 SV=1
Q9JJA4	Ribosome biogenesis protein WDR12 OS=Mus musculus OX=10090 GN=Wdr12 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08154	NLE	NLE (NUC135) domain	Domain	Interproscan
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012972	Domain	NLE	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR028599	Family	WD repeat WDR12/Ytm1	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22847	WD40 REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0042254	Biological Process	ribosome biogenesis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14863	WDR12, YTM1; ribosome biogenesis protein	-	Ribosome biogenesis	ko03009	deepkoala