Detailed information of FUN_013238-T1 in Colpophyllia natans

Genomic Location: contig_19:5842395...5866881
NR annotation: XP_020622997.1, uncharacterized protein LOC110060551 isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8HY01CD209 antigen OS=Nomascus concolor OX=29089 GN=CD209 PE=3 SV=1
Q8HY03CD209 antigen OS=Hylobates lar OX=9580 GN=CD209 PE=3 SV=1
Q8HY11C-type lectin domain family 4 member M OS=Symphalangus syndactylus OX=9590 GN=CLEC4M PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF09458H_lectinH-type lectin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037221Homologous_superfamilyH-type lectin domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR019019DomainH-type lectin domainInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR018378Conserved_siteC-type lectin, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31535REGULATORY PROTEIN ZESTEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan

TOP