Detailed information of FUN_013293-T1 in Colpophyllia natans

Genomic Location: contig_20:964960...989228
NR annotation: KAJ7373413.1, hypothetical protein OS493_013006 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P05094Alpha-actinin-1 OS=Gallus gallus OX=9031 GN=ACTN1 PE=1 SV=3
L7UZ85Alpha-actinin OS=Dermatophagoides farinae OX=6954 PE=1 SV=1
Q3B7N2Alpha-actinin-1 OS=Bos taurus OX=9913 GN=ACTN1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08726EFhand_Ca_insenCa2+ insensitive EF handDomainInterproscan
PF00435SpectrinSpectrin repeatDomainInterproscan
PF00307CHCalponin homology (CH) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR014837DomainEF-hand, Ca insensitiveInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR002017RepeatSpectrin repeatInterproscan
IPR001589Conserved_siteActinin-type actin-binding domain, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11915SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0030036Biological Processactin cytoskeleton organizationInterproscan
GO:0030054Cellular Componentcell junctionInterproscan
GO:0030864Cellular Componentcortical actin cytoskeletonInterproscan
GO:0042995Cellular Componentcell projectionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05699ACTN1_4; actinin alpha 1/4-Exosomeko04147deepkoala

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