Gene detail

Detailed information of FUN_013480-T2 in Siderastrea siderea

Genomic Location: contig_10:12529742...12574710
NR annotation: no NCBI-NR hit recorded
Species abbreviation SSIDE · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_013480-T2

CTTCAAACATGGCGGGCAGTCCTTCGCAGGTCTCCAAACAAGCCTTCCACGAGACTTACGAATTGAAAGAGGAACTGGGAAAAGGTGCATTCAGTATTGTTCGACGGTGTATACACAAGGAGACGAAAGTCGAGTATGCCGCGAAAATTATCAACACCAGGAAATTATCATCCAGAGATCTTCAAAAGCTCGAAAGAGAAGCAAGGATATGCCGGCGACTGAAACATGCAAATATCGTCAGACTTCATGCAAGCATTTCTGAAGAAGGATATCATTACCTTGTGTTTGATTTAGTAACTGgaggggaattgtttgaagacaTTGTTGCTAGAGAGTACTACAGTGAAGCTGATGCTAGTCACTGCATTCAGCAAATATTGGAAAGTGTTCATCATTGCCACCAAAATAATGTTGTTCATCGGgatttgaagCCAGAAAACTTACTTCTTGCAAGTAAAGAGAAAGGTGCTGCTGTTAAACTAGCTGATTTTGGATTAGCTATTGAAGTCGATGCTGACAAACACGGATGGTATGGATTTGCTGGTACCCCCGGTTATCTTTCACCTGAGGTACTAAAGAAAGAGCCATATGGCAAGGCTGTTGATTTATGGGCATGTGGTGTGATCTTGTACATCTTACTTGTGGGTTACCCGCCGTTTTGGGATGAAGATCAACACAAGTTGTATTCTCAGATAAAAACTGGCGCTTATGATTACCCCTCCCCAGAATGGGACACAGTCACAGATGAAGCAAAGGAACTTATAAACATGCTGCTATCAGTGGATCAGTCCAAGAGAATGAATGCCTCAGAGGCCCTGAAACATCCATGGATCGTGAACCGGGAACGTGTTGCCTCTAAAGTACACAGACAAGAGACTCTAGACGGACTGAAGAAGTTCAATGCAAGGAGAAAACTTAAGGGTGCCATCTTAACAACCATTGTGGCTCGTAGGTTTTCTGCTAATTCAGtCCGGCCTTTTGTCAGCAAGAAAAAGGGATCTGATGAAGAACTTATGGCTCATTCTGAAGATGAGCAAGAAAGTGACACTGCAGCTAATAAAGCTCGAGAACAACAAATAATCCGACTGACTCAGAAGCTTATCACAAGTATCACCACTGGAGACTTCGAAACCTATTGCAAACTAGTGGACCCGCGTTTAACAGCATTCGAACCAGAGGCTATAGGTAACCTGGTTGAAGGGCTAGAATTCCACAAGTTTTATTTTGACAATGTTCACAGCAAAAGAGCGACGCCAATCAACACGACAATTCTGTCGCCACATGTACACATGCTGGGAGACGACGCTGCTTGTATCTGCTATGTTCGACTTCAACAGTACATCAACAGGAAACTGGATGCCATGTCAAGTGCTGCGGCGTTCAACAGCTTTCGCCGCGACAGAGAGTGAAAAcattttgtccaagaatgtcaAAAATTTCAGCAGCGATTACCGAGGATgataatttaataaaacactgtTCCACTCTCGTTTGTTGGACGTGagatgattataaccaactcggcacCACGCTTCACCTTTGTCACCTCAAATCCAACGCGCGATCGTGGAATGGTTGTTAAATTTAAGCCACACCGAGGACGGCTTTTTAATTTCTCTTCACCATGTCGCTCCCAGAGGCATACATTATGTCACGGGATATCGTTGTTAACTTTTGCTTCTGtaggtgaaatcctaaagtggaCTAGCTACTAGAATATCAGAATGTGAATGTTTCTATTTCAGTGCTGGTGTACCCTTAACAAAGCAGTCGGAAGAAACGCGAGTCTGGCACAAGAAGTCGGGGCACTGGGTCAACGTACATTTTCATCGATCGAACATGACTGGCAGTCCAAGCAGCTAAGGAGATCAAGTCACTGCACTGACAGTGCAACGAGACTTCATCATCTCATTTGACGGGGACACTTTTCCTGGAAGAGGACTGGAACGAGAACGGAGAGTGACGTTTCTGTTCGGAAAGGGTGCAATGCATGATGGGTACAGAAATGAAGGAACTTCCTTGAAAGAAAAGTTGATCCCAGAAAATAGTAGTTTAATTTAAAATGAGACGATAatatgatgaaaaaaaaaactgaactttcTTTCGACGGACACATTACGTGAGATCTATGAATGTGAATTCCACAATTCAGTACCAGACCTTTGAATCTCAGAGACAAATCTCAAGTCGATTTTTCAAACTGCgttttttaaactattttaGTTGTGGATAGAATCCttttttattgtgacaattcaATTGAAAATTACTGCgcagtactttcttgtagtATTGTTTATTGGGCTGGAAAAGGAAGCTCTAACATTCAcggagtctgtggataaaaccgTTTTAAGTGTGACCGGGTCTAGTTTTAATATTATAGTAACCGTAATTGGGATTCTGTGCACttgggaaagaaaaggtttaaTAGACAAGGTTGTAAGTATTATCAGTACTATATAGTTCTTTTAATTGTGCCCAAATAGGATATTTTTTGCTTGGACAGTTTAGTCTCTCTTTATTGCAAGAAGCCAAGAAAAAAGTCACACTACACGGCTAAGTCCTCACGTAAGGAggatatttattaatttatttggaTGCACATATTGTCGTAGGTCTTAATAgccaaattttaaattttaaatataTATGTTTATATATATTCAATCGAAGTAGAATTGAGAGCAAAATGGTTTACATGGCATGAATCAATCCAATTTTTATTGCTAGGAATTaggaatttatttcaattttaatggCTTTCTGTGGGGTTATACCCCAGTTAACGAATTAAGTTTTAAGACAGTACATTTCACTGCAAGAGTATCTTAGAACTGTCTATTACGTGTAGTTTTGTAAGAAACCAATACTGGAGAATGTTTTGTGAAGAATTACGACCCCGAGGTGAAAACAAAAGAGTCCAAAAAGTGAAGTGTCTGAGAATTTGAATTTCCAGAGCAATTATAACATTTCGCGGACAGGTTTCAAGTTTACGATAAACATTGCGTAACAAATGTACTCTTTTGCTGTTCGAATCCGCCAATAATTTATTTTGCTGCTATTTGCAACAATCTTTCGTGTCACAGTAACCTCCAATCCAATCATTGACGTTGTACAATTACAGTTGACTGATTGGCCAGTAGCTGACGAAAACGTTTGGTGATTTTCATTGGTTCAGAGCACTTGTTGGAGTCAGGGAAACACGTGACTGATATTCAGCAACCATAGTCCAGTTTCGAGTTCGCAAAGGTCGCTCGGTAAAAAGACGAAGGACGCATTTTAGAGGGTTAGTCTCACAATCGATCAGTGAGAAGATGAACTTCCCGTATTCACAACTCGGTGTATTATCTGATTTTAGAATTCAGCACTTTCCTGCTCCTTTTTATGCATATTTTCCTTCAGATTAAGAAGAGCCCTGCTCAGCGGTCTTGGTGAAATGGAGACTGGACTATTTGACGCGACAGAAATAATTTTGTAATTGGTGGATTTAAACAGCACGAGTTTTGGACATTCAGTACTCCTGGGATAGAGTCCAAGTTGTTTCAAGAGCAAAACATTTTACAAACACCACTtaccattttattaaaaaaaacattttgttgccGAGGCAATATTCTGATAACGAAAACAAAAGTTGTCGGTTTTGTAGGTAGACCGGTGGTAGAAACTGTAGAGTAGAGCTGGTCGTAGTGATTAAAAAAGGCAATCAATATGGCCGAGGCGATTCATGTGCTGCGATATTTAAAAGGTGTGTTAACTGCAGGTTTTTTTCCCTTTAAGAGATCCTCTCGGGCAGTAGTTGAGGAGGCGACTTGACACAACAGGCTATAGGGAAATGTTTAGGTGTCATCTTCAGTGGATCGGAAGCGAAAGCGGCCATCGTTTCTCGGACACTCGTCTAGAGTAGCAAATATTCATCTCCTGAGAACTGCTGGTTAATCGCTAACACAAAAGGCGTTTCTCTGGTCCATATCCCAACGAGGCCCGGCCCAATAAACGATCAGGTTTGAAAACATCCCTTGCGCTGATGCAAATCCCTCCCAAAGCGACGCAAATTGGCACCAAAACACCGGTTGATTAGTTTCCGTTTTACAAACGATTTTTATTCAGTTACAGATCAGGTGGTTGGGTGTGGGCCAATCTGCTTATCCTGTATATATACCCCACAGAGCGTTTGGGGATCCCTGTGCTACAGATCAGATGGTTGGGCGTGGGCCAATCAGCTTATCCTGTATAAATACCCCACAGAGCGTCTGGGTCCCTGTGCTACAGATCAGGTGGTTGGGCGTGGGCCAATCAGCTTATCCTGTATAAAAACCCCCAGAGCGTCTGGGTTCCCTGTGATACAGAACAGGTGGTTGGGCGTGGGCCAATCAGCTTATCCTGTATAAATACCCCACAGAGCGTCTGGAGTCCCTGTGCTACAggggcaaaaattaaaacaaccgGTTTAGATGATAAATTTAACAAACCACAAAAACCATCTGAGTAACATCAATTCAATGCTTTTACTAACAACTTTGGAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08332 all species →	CaMKII_AD	Calcium/calmodulin dependent protein kinase II association domain	Domain	Interproscan
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR013543 all species →	Domain	Calcium/calmodulin-dependent protein kinase II, association-domain	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR032710 all species →	Homologous_superfamily	NTF2-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24347 all species →	SERINE/THREONINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004683 all species →	Molecular Function	calcium/calmodulin-dependent protein kinase activity	Interproscan
GO:0005516 all species →	Molecular Function	calmodulin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04515	CAMK2; calcium/calmodulin-dependent protein kinase (CaM kinase) II	EC:2.7.11.17	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.