Detailed information of FUN_013669-T1 in Dendrogyra cylindrus

Genomic Location: contig_20:5282307...5284900
NR annotation: KAJ7373565.1, hypothetical protein OS493_011168 [Desmophyllum pertusum]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010151 (this species only)

 Pfam domain
No Pfam domain signature was detected for FUN_013669-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR000812
all species →		FamilyTranscription factor TFIIBInterproscan
IPR036915
all species →		Homologous_superfamilyCyclin-like superfamilyInterproscan
IPR013137
all species →		DomainZinc finger, TFIIB-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11618
all species →		TRANSCRIPTION INITIATION FACTOR IIB-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006352
all species →		Biological ProcessDNA-templated transcription initiationInterproscan
GO:0070897
all species →		Biological Processtranscription preinitiation complex assemblyInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0017025
all species →		Molecular FunctionTBP-class protein bindingInterproscan
GO:0097550
all species →		Cellular Componenttranscription preinitiation complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15197BRF2; transcription factor IIIB 50 kDa subunit-Transcription machineryko03021deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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