Gene detail

Detailed information of FUN_013934-T1 in Dendrogyra cylindrus

Genomic Location: contig_21:3658742...3661629
NR annotation: KAJ7388596.1, hypothetical protein OS493_036824 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

FUN_013934-T1

ACGACTATTGCACCACCACGTACTGAAATACTGCAATTTTTGGGCTAAATTTTATCTTTTCCGTTCAAGTTCCTCGGAGGGTAAACGAGGGATCCTGTGTGCTGTGTGTATTCACTGAGTTGGCTTGCGGCTGAAGACGACAGCGTTGGCGCCGAATATTTACACTTCGGCGTCCGGAGGAAAAATTTCCAAAAAGTTCAAGGCTTAGCCACACAACGGCAGTTTCGACTCACAACTCttcatttaaaaattcaaaatgcaaGAATTCAAAGCCGTCGCAACATTTAGCTTCTCTGCCATTAATAGAGACTATCCCTGTAGGCCTTTGCGTCGAAAGAGTCGACCGTCAAGTCGACTCGATCGAAGCAAAGGAGAACATTCTTTACACCGGCGAAGTTCACGTgaacaacgaaacgaaaatgGAACACTGCAAGGAAACTACGGAAAACATTGGAAACGAATCTCCGACTCTGAATACCTGTGGCCTGTTTGATGATCTAGATATACTGCATTCTTTGGAAGACACTGAAAGTTTGGATCAGATTTGTCCTGAAGATGCCAAGTACCCACTTGGCCTACTTGACGAGTTAAACATCAAGTCATTAGAGCCAGCCAGCCTTCCATTGGAGAGTTTACTGGATCTCAGTGAGTCGTCAAACTGTATGGACAATCCATTCTTCGAGCAATTCATAGATCTTGACCACCTGTTTCCAGAACTGCCCCTTCTCGACACGCTGATGGGGTTTGAAGCAGAGCAGACCTCCCCAGTCGCCGCTTCAGACATTTGCCAATCAGATGTAGTGACAGTGGCAACTGGGAGCCCTGGTGATGATTACATGGAAGTGCCTTCCCCTGATAGTGAAGTGATTGATGTGGTTTCACTTGAAAGTGATGCTGAGGTCGCCTCGTCAAGAGATGACTTATCTGATGTCGCTCTGTCCCCAGAGAGTGTCGTGGATGTCATGTCTGTTGATGAGGGTGAAGAAGACCCTAGTAATCTCCCGTCAAGTGTTTATCAGGTCGTCATTGACAGCGACCAAACAGAACCCACTTCTGAAATCGTTGCTGAAGAGATCACGGTTGTTCAAACGTCGGATGCTTTGACTCTCTTGACACAAGAACTGACACAGTCTTCTGCCTCGTATGCTAGTGAGCTTGTGATTACTTCATCAGAAGAACGGCAATTGGTCAAAGACTCTGAAAGTTTGCCAACTGTAACAGTTGACATTGATGAACTTTTCTCACTTTCTCATTCTCTTGGACTTGCAGACAGTGTAGACTTGCTTAGTGACGGACATATAAGTAGTAGCGAAAGTGTTGTAAGCTCATCAGAAATGTCTGTGAAAGCTCAACCTAAGCAGAAGAGAAAGAGAGCATGTTCTTCAGATTCCTCTGATTTGCCGGCAAAGAAAGTCAAGTGTCACGATACCAACAAAGACAACTCTACCAGTGAACTTTTGAGCACCGCAGATGTTCTCGACAGACGTACCGTGAGAAGACTAAAGAATAACATTGCATCAAAGCATGCTCGTGCAGCCAGGAAGCAAAAAGAACTAGATTTGTTCCAACAGGAGGAGGAATTGGAGAAAAGCAATGCCGAGCTGCGAAAGCAAGTGGAAGAGCTTGAGCAGCTTACAAATATGTTAAGAAAAGTTCTTGTAGAAAAACTAAGTGGGGTGACTTGTCCAGTGTAAagggaaaaaaatgaaaaaaatatcatcattgccaaaaaaatgagaaaaccaaaaaaaggcgaaaaaaaaatgtattaacCATTTTGCTTACCAGTATGGCATCATAGCCAAGTTGGCGAAACAGCCCATTCAGTGTAATTACTCAATATTTAACCCAGTATTTTAGCTTTCATAGCCTTTGTAaattaatacttttttattgtTGGTCATCGTACTTAATCAGGTCATAAACAAGAAATAAACATGATGATAATATATGTTGCTTTGTTGTAGTCCTTGCTGTATATCAGTGGTTATTTAAGCAGAactgaaagtttgggagaatgcTGTCCATTAAAGAAAAGCTGCAGAGAAAATTAATGTTTGTactgatgttttcagttctcccaaactttcataAAAATGCATGAACAAGACTAGTGTAATATTCGAGTTGGCACTTGAAGAATTTGAGTTTCATGTACAGTGGGTACACATCGTGTGTCAAATTTGGAAGAAAACATAACATCCAGGGGAAGGATAGCCTGCGAAAACAACCGCCTTACATCACTCCTGGTGAAACACCAAACCGGCGGGAAGCGATGAGAGGCAGCTGTATTCACAGGCTAGGGGAAGGATCGCCACCCGGCACTTACCAAACTATTCAGGCCAAAATTAGTAATGCTTTGTAATTCAAACACAAACTCGCAACTTGTGAAATAGACAATCCTGTTGATATTTATGAAACTGAATTCTATTTTCCTCTTGGAAAACATTCACCATTTCCACATCTCCCATAAACACCttgtttgccccccc

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	TF_bZIP

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07716	bZIP_2	Basic region leucine zipper	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004827	Domain	Basic-leucine zipper domain	Interproscan
IPR046347	Homologous_superfamily	Basic-leucine zipper domain superfamily	Interproscan
IPR000837	Family	AP-1 transcription factor	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23351	FOS TRANSCRIPTION FACTOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04374	ATF4, CREB2; cyclic AMP-dependent transcription factor ATF-4	-	Transcription factors	ko03000	deepkoala