Detailed information of FUN_014152-T1 in Dendrogyra cylindrus

Genomic Location: contig_22:623829...642198
NR annotation: XP_020607236.1, malignant fibrous histiocytoma-amplified sequence 1 homolog [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZHW4Ras-related protein Rab-5B OS=Gallus gallus OX=9031 GN=RAB5B PE=2 SV=1
P61020Ras-related protein Rab-5B OS=Homo sapiens OX=9606 GN=RAB5B PE=1 SV=1
P61021Ras-related protein Rab-5B OS=Mus musculus OX=10090 GN=Rab5b PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16095CORC-terminal of Roc, COR, domainFamilyInterproscan
PF00531DeathDeath domainDomainInterproscan
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR025662Binding_siteSigma-54 interaction domain, ATP-binding site 1Interproscan
IPR032171DomainC-terminal of Roc (COR) domainInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR000488DomainDeath domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR050715FamilyLeucine-rich repeat and signaling effector domain-containing proteinInterproscan
IPR020859DomainRoc domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45752LEUCINE-RICH REPEAT-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan

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