Gene detail

Detailed information of FUN_014618-T1 in Acropora pulchra

Genomic Location: ptg000009l:1613057...1618492
NR annotation: XP_029194198.1, ethanolamine-phosphate cytidylyltransferase-like [Acropora millepora]
Species abbreviation APULC · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

FUN_014618-T1

CGTAATGTATTAGGAACGGTGTACTTTCGCGTTATTTTGACATAATTGTCAGGTGATTTTCCGAACTAAAATCAATTTTAAGCGCTAATATGGAGAACTGTGAGGCAGCTCCCAATGAACAAAAACACCGTAAGCAGATCCGTGTTTGGACCGACGGTTGCTTCGATATGGTTCACTTTGGGCACGCCAACGCTCTGAGACAAGCGAAGTTGATGGGCGATGTCTTGATTGTTGGTATCCATTCTGATGCGGAAATCACGGTGCACAAGGGTCCACCGGTTTTTAATGAGCAAGAAAGATATAAGATGTGCAGAGCGATCAAGTGGGTCGATGAAGTTGTTATGGGCGCCCCTTACGTGACAACAGTAGAAACTCTTGACGAGTACAACTGTGATTTTTGCGTACATGGCGATGACATTACTCTTACGGCAGATGGTCACGATACATATGCCGCTGTCAAAGCTGCTGGTCGATACAAGGAATGTAAGCGCACGGCCGGAGTTTCCACTACAAACTTAGTAGGAAGGATGTTACTGATGACCAAGGAACATTTTGACAGGGCTCCCTCACCCATAGGAAATTTGGATCCTGGTCAGGTGAGTGGGGCCAGCTCTGATCCATCAGCCAAGAGCCCCTGGACATGTGTGTCACATTTTCTGCCAACTTCTCAAAGGATAGTCCAGTTCTCAGATGGAAAGGAGCCAAACCCTGGTGATAAAATTATCTACGCTCCTGGTGCTTTTGACCTTTTTCATGTTGGACTTCTAGATTTCCTTGAGGCAGCAAAAAAGCAGGGGGACTATCTCATTGTTGGTCTCCATACAGATCAAGTTGTCAACCGATACAAGGGTAGTAACTACCCAATCATGAGCCTGCATCAGAGAGTACTAAGTGTGCTTGCCTGTCGCCATGTTGATCAAGTAATAATTGGTGCACCTTACACAGTGACAACAGAACTCTTGGATCAATTTAAGGTTGATCTCGTGGTTCATGGTGAGACAAAGATCATGGGGGATGAAAATGGTAAAGATCCTTTCAAAATACCAAAAGAAAAAGGATTGTTCAAAGTTGTAGCAAGTGGCTCCCCGTTGACAACTCATGCCATTGTGCAAAGAATTATTAAGAACAGATTGTTGTTTGAAGAACGAAACAAGAAGAAGGAGAAGAAAGAAGCAGATTGCTTTGCAGCCATAGAAAAATTGGCGGCTCAAAAGCAAGAAAGAAAGGCTCTCGAAGAAAAGGAAAATGTGTAACTAAACCAAGTTAAATTTCATCATTGTTGCTAAGAATGTTTTAGAAACAACTTTTTAATAATTAGTTTGCATTGCAGTTGTTTTTAGGCACACTATGAGGCTATGATTAAATAAAATGTTATGTGCCTTTGTCACACATTATCAGTTTGACAAAGGGAACTTTTTAATGAAGAATTTTACTCAATCAGGGAGTCATTATTATTCAAAGTCATTATTATTCATGCAATATTCTAATAAAAAGAATATGCCAGTAATGTACACTATTTTTAGGGGTTTCATATTTATTATTGAATTTACTCAAGAGAAAATTGAAAAAGAATCCAACACAATCATTTGAAGTGTAGTTTGCATTTTCCCAAGTTATAAATTCCTGTTTTCAAAAAAGTGGTTTCTCTGTTCATGATTAGTTACTTTCCCCAGTGCAACACTACCTTTCCAGGAGGGGCAATAGCTCTTATCGGAGTTATCAGCGGTTTTAACACATAAACGAGGCTATAGGCTCATTTTCCATTGTATTGACCCATTAGCCTCGTCTGCACGTAGCTGTAAACAAAGAAGGCTTTGCCCGTGAGCACAACTGTGATAACAGCTATGAAACTGTAGCTCCTAGTTTTTCAAAAGGTGGACAGCATTCCCCCGTGGTTAACTCAATATGGTTTAGTTCTACTTATGTAATGGGCAGTGTTAGTGGTTTATCCACTTGAGAGCACTATGCAACCCTTGAAAAAACGACCTGAAAAACAAAAAAATCCATTTTATAGAAGGCAACAATGAAGAGATCAGAACACTGGACTGTAGACTTTCTTCGTCAACTCCGACTGAGGTAATCTGTAGGATGATCAAAAGCCAACTTCTTCATGCCATGCCATTATTTTCATTTCACAAACTATTAAATAGAACTGCTGTGAATTCCAATGCTAGATGGCCACACTGTTTGTGCTTAATACAGTAATTGCCAATTAATCTGATTAGAGGAATCTAACATGCCTTTAAGTTTAGTTCAATAAAACACAACAGAACCGAAATAACTTTATCCGAAGGTCTAAAGGTAGTTGACTGTATTGTTTTTGCCCAAGGAAAAAAGGATTGCTTCATGGTATTCTGTTGTTAGTACAGTAAGCAGAGCTTCTTCTTGCTCTTCCATTTTCTTGAAGGAACGCGAAATAAAGAAGAGTAACTGTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O88637	Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus OX=10116 GN=Pcyt2 PE=1 SV=1
Q99447	Ethanolamine-phosphate cytidylyltransferase OS=Homo sapiens OX=9606 GN=PCYT2 PE=1 SV=1
Q922E4	Ethanolamine-phosphate cytidylyltransferase OS=Mus musculus OX=10090 GN=Pcyt2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004373 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01467 all species →	CTP_transf_like	Cytidylyltransferase-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR004821 all species →	Domain	Cytidyltransferase-like domain	Interproscan
IPR041723 all species →	Domain	CTP:phosphocholine cytidylyltransferase domain	Interproscan
IPR044608 all species →	Family	Ethanolamine-phosphate cytidylyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45780 all species →	ETHANOLAMINE-PHOSPHATE CYTIDYLYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan
GO:0004306 all species →	Molecular Function	ethanolamine-phosphate cytidylyltransferase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006646 all species →	Biological Process	phosphatidylethanolamine biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00967	PCYT2; ethanolamine-phosphate cytidylyltransferase	EC:2.7.7.14	Phosphonate and phosphinate metabolism	ko00440	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.