Genomic Location: contig_22:4524278...4546909
NR annotation: XP_020605503.1, E3 ubiquitin-protein ligase TRAIP-like [Orbicella faveolata]
| CDS | |||||
| FUN_014684-T1 | |||||
| Transcript |
| FUN_014684-T1 |
| Protein |
| FUN_014684-T1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Ubiquitin Family | E3|E3 activity RING|U-box |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13639 | zf-RING_2 | Ring finger domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR052639 | Family | TRAIP E3 ubiquitin-protein ligase | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46569 | E3 UBIQUITIN-PROTEIN LIGASE TRAIP | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0031297 | Biological Process | replication fork processing | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| GO:0090734 | Cellular Component | site of DNA damage | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11985 | TRAIP, TRIP; TRAF-interacting protein | EC:2.3.2.27 | Ubiquitin system | ko04121 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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