Detailed information of FUN_014970-T1 in Acropora pulchra

Genomic Location: ptg000009l:4878065...4886283
NR annotation: XP_029192266.2, uncharacterized protein LOC114958609 isoform X2 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P18887DNA repair protein XRCC1 OS=Homo sapiens OX=9606 GN=XRCC1 PE=1 SV=3
O54935DNA repair protein XRCC1 OS=Cricetulus griseus OX=10029 GN=XRCC1 PE=2 SV=1
Q60596DNA repair protein XRCC1 OS=Mus musculus OX=10090 GN=Xrcc1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001841 (this species only)
Ubiquitin familyUBD|ZnF|UBZ · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01834
all species →
XRCC1_NXRCC1 N terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008979
all species →
Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR002706
all species →
DomainDNA-repair protein Xrcc1, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11370
all species →
DNA-REPAIR PROTEIN XRCC1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006284
all species →
Biological Processbase-excision repairInterproscan
GO:0000012
all species →
Biological Processsingle strand break repairInterproscan
GO:0003684
all species →
Molecular Functiondamaged DNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_014970-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP