Detailed information of FUN_015149-T1 in Acropora pulchra

Genomic Location: ptg000009l:6766016...6767603
NR annotation: XP_044173782.1, lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6NUE2Carbonyl reductase family member 4 OS=Xenopus laevis OX=8355 GN=cbr4 PE=2 SV=1
Q6P0H7Carbonyl reductase family member 4 OS=Danio rerio OX=7955 GN=cbr4 PE=2 SV=1
Q68ER2Carbonyl reductase family member 4 OS=Xenopus tropicalis OX=8364 GN=cbr4 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0010518 (this species only)
Transcription factor familyzf-LITAF-like · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10601
all species →
zf-LITAF-likeLITAF-like zinc ribbon domainFamilyInterproscan
PF13561
all species →
adh_short_C2Enoyl-(Acyl carrier protein) reductaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006629
all species →
DomainLPS-induced tumour necrosis factor alpha factorInterproscan
IPR002347
all species →
FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR036291
all species →
Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42760
all species →
SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016616
all species →
Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_015149-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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