Detailed information of FUN_015216-T1 in Acropora pulchra

Genomic Location: ptg000009l:7566631...7583798
NR annotation: CAH3043312.1, unnamed protein product, partial [Porites evermanni]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q58DM4DNA oxidative demethylase ALKBH2 OS=Bos taurus OX=9913 GN=ALKBH2 PE=2 SV=1
Q6NS38DNA oxidative demethylase ALKBH2 OS=Homo sapiens OX=9606 GN=ALKBH2 PE=1 SV=1
Q6P6J4DNA oxidative demethylase ALKBH2 OS=Mus musculus OX=10090 GN=Alkbh2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004935 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13532
all species →		2OG-FeII_Oxy_22OG-Fe(II) oxygenase superfamilyDomainInterproscan
PF21229
all species →		TdIF1_2ndTdIF1, C-terminalDomainInterproscan
PF18192
all species →		DNTTIP1_dimerDNTTIP1 dimerisation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027450
all species →		DomainAlpha-ketoglutarate-dependent dioxygenase AlkB-likeInterproscan
IPR037151
all species →		Homologous_superfamilyAlpha-ketoglutarate-dependent dioxygenase AlkB-like superfamilyInterproscan
IPR005123
all species →		DomainOxoglutarate/iron-dependent dioxygenaseInterproscan
IPR049121
all species →		DomainTdIF1, C-terminalInterproscan
IPR026064
all species →		FamilyTerminal deoxynucleotidyltransferase-interacting factor 1Interproscan
IPR041384
all species →		DomainDNTTIP1, dimerisation domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23399
all species →		DEOXYNUCLEOTIDYLTRANSFERASE TERMINAL-INTERACTING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0031491
all species →		Molecular Functionnucleosome bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_015216-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP