Detailed information of FUN_015370-T1 in Dendrogyra cylindrus

Genomic Location: contig_24:2192129...2200558
NR annotation: XP_020608611.1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9NP66High mobility group protein 20A OS=Homo sapiens OX=9606 GN=HMG20A PE=1 SV=1
Q9DC33High mobility group protein 20A OS=Mus musculus OX=10090 GN=Hmg20a PE=1 SV=1
Q5ZKF4High mobility group protein 20A OS=Gallus gallus OX=9031 GN=HMG20A PE=2 SV=1
Gene familySubfamily
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan
PF12171zf-C2H2_jazZinc-finger double-stranded RNA-bindingFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009071DomainHigh mobility group box domainInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR051965FamilyChromatin Regulation and Neuronal Gene ExpressionInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR022755DomainZinc finger, double-stranded RNA bindingInterproscan
IPR003604DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46040HIGH MOBILITY GROUP PROTEIN 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24660HMG20A; high mobility group protein 20A-Chromosome and associated proteinsko03036deepkoala

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