Detailed information of FUN_015572-T1 in Acropora pulchra

Genomic Location: ptg000009l:12282383...12286154
NR annotation: XP_044170601.1, protein strawberry notch homolog 1-like isoform X2 [Acropora millepora]
Species Acropora pulchra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0JND4Protein strawberry notch homolog 2 OS=Bos taurus OX=9913 GN=SBNO2 PE=2 SV=1
Q9Y2G9Protein strawberry notch homolog 2 OS=Homo sapiens OX=9606 GN=SBNO2 PE=1 SV=3
Q7TNB8Protein strawberry notch homolog 2 OS=Mus musculus OX=10090 GN=Sbno2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000611 (this species only)

 Pfam domain
No Pfam domain signature was detected for FUN_015572-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR026741
all species →		FamilyProtein strawberry notchInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12706
all species →		STRAWBERRY NOTCH-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0031490
all species →		Molecular Functionchromatin DNA bindingInterproscan
GO:0042393
all species →		Molecular Functionhistone bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for FUN_015572-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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