Detailed information of FUN_015670-T1 in Dendrogyra cylindrus

Genomic Location: contig_25:1120912...1142269
NR annotation: XP_027055131.1, voltage-dependent L-type calcium channel subunit beta-2-like isoform X2 [Pocillopora damicornis]
Species Dendrogyra cylindrus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P54288Voltage-dependent L-type calcium channel subunit beta-2 OS=Oryctolagus cuniculus OX=9986 GN=CACNB2 PE=1 SV=1
Q08289Voltage-dependent L-type calcium channel subunit beta-2 OS=Homo sapiens OX=9606 GN=CACNB2 PE=1 SV=3
P19517Voltage-dependent L-type calcium channel subunit beta-1 OS=Oryctolagus cuniculus OX=9986 GN=CACNB1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001296 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00625
all species →		Guanylate_kinGuanylate kinaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008145
all species →		DomainGuanylate kinase/L-type calcium channel beta subunitInterproscan
IPR000584
all species →		FamilyVoltage-dependent calcium channel, L-type, beta subunitInterproscan
IPR036028
all species →		Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11824
all species →		VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005245
all species →		Molecular Functionvoltage-gated calcium channel activityInterproscan
GO:0005891
all species →		Cellular Componentvoltage-gated calcium channel complexInterproscan
GO:0070588
all species →		Biological Processcalcium ion transmembrane transportInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K04863CACNB2; voltage-dependent calcium channel beta-2-Ion channelsko04040deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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